Solanum pennellii: 107014325
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Entry
107014325 CDS
T04130
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107014325
03036 Chromosome and associated proteins [BR:
spen03036
]
107014325
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107014325
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107014325
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107014325
microRNA pathway
RISC loading complex
107014325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Clr5
Motif
Other DBs
NCBI-GeneID:
107014325
NCBI-ProteinID:
XP_015069669
UniProt:
A0ABM1GDQ9
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Position
3:64785743..64793041
Genome browser
AA seq
1152 aa
AA seq
DB search
MVRKRRTELPGSGESSGSQETVGGQGRGQYPPQQQQQGGYQGGGQGRGMRPPPQHQQQLG
GYQGGGQGRGQRPPQQHQHEGGYQGGGQGRGMGPPPQQSQQEGGYQGGGQGRGQRPPQQL
QQEGGYQGGGRGWRPQQGGYGGRGSGGAPRGGMAPQQPYGGQAEYYQQGRGTQQHQQRGG
GPLQQHGGIGGRGAPSGGPSRPPIPELHQATTQTQHQAVMTTQPITYGRPADTSMEVGSS
SEPPEMSALQVTQQFQQLAVQPEAAATHTIPPVSSKSLRFPLRPGKGKFGQSCIVKANHF
FAELPDKDLHQYDVTITPEVSSRGVNRAVMAQLVLLYQESHLGKRLPAYDGRKSLYTAGP
LPFVQKEFKITLTDDEDGPGGARRDREFKVVIKFASRADLHHLGMFLEGRQADAPQEALQ
VLDIVLRELPTSKYCPVGRSFYSPNLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMS
STSFIEPLLVVDFVAQLLNRDVSSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRIAN
LTSQATRELTFPVDEKGTLKSVIEYFRETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKI
VEGQRYSKRLNEKQITALLKVTCQRPQERERDILETVKHNAYAEDKYAKEFGIKISDKLA
QVEARILPPPWLKYHDNGREKDCLPQVGQWNMMNKKMVNGGTVANWICINFSRNVQDTVA
HGFCSELAQMCGISGMNFNPNPVLPPVSARPDQVERVLKTRFHDAMTKLQPLSKELDLLV
AILPDNNGSLYGDLKRICETELGVVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVL
VDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAH
RQELIQDLYTTKQDPVKGTVSGGMIKDLLISFRRATGQKPQRIIFYRDGVSEGQFYQVLL
YELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHRDRNAVDRSGNIIPGTVVDSK
ICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFSADGLQSLTNNLCYTYARCTRSVSI
VPPAYYAHLAAFRARFYMEPETSDGGSVTSGAAGRGVGAGAAGRNTRAPGAGSAVRPLPA
LKDNVKRVMFYC
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaactgagttacctggttcaggtgagagctctgggtctcaagaa
actgttgggggacagggtcgtggccagtatccaccccagcagcaacaacaaggtggatac
caaggtggaggacagggtcgtggcatgcgtccaccaccacagcatcaacaacaattaggt
ggctaccaaggtggagggcagggtcgtggccagcgtccaccccagcagcatcaacatgaa
ggtggctaccaaggtggaggacagggtcgcggcatgggtcctcctccccagcagtcacaa
caagaaggtggctaccaaggtggtggacagggtcgtggccagcgcccaccacagcagcta
caacaagaaggtggttaccaaggtggaggaagaggttggaggccacaacagggaggatat
ggtggccgtggtagtggaggagctccacgtggtggaatggcccctcaacagccatatggt
ggacaggctgaatactatcagcagggcagagggactcagcagcatcaacaacgaggtgga
ggaccactccagcaacatggtggcataggtggccgtggagcaccttctggtgggccttct
aggccaccaattcccgagctgcaccaagcaaccacacagactcaacatcaagctgtaatg
actactcagcccattacttatggaagaccagctgacacatccatggaagtgggttcctca
tctgagccacctgagatgtcagctctgcaagtgacacaacagttccagcaactggctgtg
cagccagaagcagctgcaacccatacaattccacctgtgtcaagcaaatcactaaggttt
ccgctgcgtccagggaagggaaagtttggtcagagttgcatagtgaaagccaatcacttc
tttgctgagctgcctgacaaagacttgcatcagtatgatgtcaccattactccagaagta
tcttcacgaggggtcaaccgtgctgtcatggcacagctggtgcttctttaccaagaatct
catcttggaaagagacttccagcttatgatggaaggaaaagtctatacactgcagggccc
cttccatttgttcaaaaagagttcaaaatcactcttactgatgatgaggatgggcctggt
ggtgccaggagggatagggaattcaaagttgtgatcaaattcgcttcccgagccgatctt
catcacttagggatgtttttagaagggaggcaggctgatgcaccccaggaggcgctgcag
gttctggatattgtgctgcgtgagttgccaacatctaagtattgtcctgtaggtcgttct
ttctattctcctaatttagggagacgacaaccattgggagagggtttagagagctggcgg
ggtttctatcaaagtattcgccctacacaaatgggattatcattgaacatcgacatgtct
tccacttccttcattgagccattgctggtcgttgattttgtggcacagcttctgaaccgg
gatgtgtcatctagaccactgtctgatgctgaccgtgtaaagatcaaaaaagcactgaga
ggtgtgaaggtggaggttactcatcgtggaaatatgcggcggaagtaccgcatcgccaat
ttaacatctcaagcaacaagagagttaactttccctgttgatgaaaagggcactttgaaa
tctgtaattgaatattttcgagaaacttatgggtttgtaattcagcatacccagtggcct
tgtctgcaagttggaaatcagcagagacctaattacttgccaatggaagtctgcaagatt
gtagagggacaaaggtactcaaagcgcttgaatgagaaacagataacggcacttctgaaa
gtgacctgccagcgcccccaagaaagggagcgtgatattcttgagactgtgaagcataat
gcctatgctgaggacaaatatgcgaaggagtttggcattaagattagcgacaagttggca
caagttgaggctcgtattttgcctccaccttggcttaaatatcacgataatggccgagaa
aaagattgtctgccacaagttggtcaatggaacatgatgaacaagaaaatggttaatgga
ggaactgttgccaattggatctgcataaacttttctcgcaatgtgcaagacactgttgca
catgggttttgttctgagcttgcacaaatgtgtggaatatctggaatgaacttcaacccg
aatcctgttctgcctcctgtaagtgcacgccctgatcaggttgagagagttttgaaaact
cgatttcatgatgccatgacaaagctgcagccgctatcgaaggagcttgatctcctggtc
gctatcttgccagacaataatggctctctttatggtgatctgaaacggatttgtgagact
gagcttggagttgtttcacagtgctgtttgacaaaacatgtatttaagatgagcaaacag
tatctagccaatgtagcactgaaaattaatgttaaggtgggaggaagaaacactgtgcta
gttgatgcaatatctaggcgaattccccttgtcagcgaccgtcctacaatcatttttggt
gcagatgtcacccatccccaccctggagaggactcgagcccatccattgctgcggtggtt
gcttctcaagattggcctgagattactaagtatgctggtctagtttctgctcaagcccat
aggcaagagcttattcaggatctgtacacaactaagcaagatcctgttaaagggactgtg
tccggcggcatgattaaggacttacttatctccttccgaagagctactgggcaaaaacct
cagagaatcattttctacagggatggtgttagtgaagggcaattttatcaagttcttctt
tatgaacttgatgccatacgtaaggcatgtgcatcattggagccaaattatcagcctcca
gttacatttgttgtggttcagaaacgacatcatactagactttttgctaacaaccaccgt
gatagaaatgctgttgatcggagcgggaacattatacctggtactgttgttgattcgaag
atttgccacccaacagagtttgatttctatctttgtagtcatgctggcatacagggtacg
agtcgtccagctcattaccatgttctatgggacgagaacaagttttcagctgatggactg
cagtcattgacaaacaacctgtgctatacatatgcaaggtgcacacgctcagtctccatt
gtccctccggcctattatgcacatttggcagcttttcgtgctcgtttctatatggagcct
gagacatccgacggtggatcagtaacaagcggagctgctggcagaggggttggtgcagga
gctgctggaaggaatacacgagcaccaggtgcaggttctgctgttagacctcttcctgct
ctcaaggataacgtgaagagggtcatgttctattgctag
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integrated database retrieval system
