Solanum pennellii: 107014336
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Entry
107014336 CDS
T04130
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spen04990
]
107014336
Domain-containing proteins not elsewhere classified [BR:
spen04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107014336
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
KNTC1_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
107014336
NCBI-ProteinID:
XP_015069690
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All DBs
Position
3:complement(72364971..72371256)
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AA seq
609 aa
AA seq
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MADLKETYACIPSTERGRGILISGDPKSNSILYCNGRSVIIRYLDRPLQVAVYGEHAYQA
TVARYSPNGEWIASADVSGTVRIWGTHNDFVLKKEFRVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIATCGEDFLMNFYEGPPFKF
KLSHREHSNFVNCLRFSPDGSKLISVSSDKKGIIYDAKTGDIIGELSSEGGHQGSIYAVS
WSPDSKQVLTVSADKSAKVWDISDDGKGKVKKTLASPGSGGVEDMLVGCLWQNDHLVTVS
LGGTISIFSASDLEKPPVSFSGHMKNVNSLAVLRSDPKIILSTSYDGLIVKWIQGIGYSG
KLDRKVTSQIKCFAVVEGELVSCAFDNKIWRVSLLGDQCGDANSIDVGTQPKDLSLALNS
PEVTLVSFETGVILLRGTKVLSTINLGFTVTASVISPDGTEAIVGGQDGKLHFYSITGDS
LNEEVVLEKHRGAITIIRYSPDVSMFASADVNREAVVWDRASREVKLNNMLYHTARINCL
DWSPDNTMVATGSLDTCVIIYDISKPASHRITIKGAHLGGVYGLAFTDERSIVSSGEDAC
VRVWGITPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgacctcaaagaaacttacgcttgtataccttctaccgaacgaggtcgcggtatt
ctcatttcgggtgaccccaaatccaactctatcctttattgtaatggccgatccgttatt
atccggtatctcgaccgcccgctccaagttgcagtttacggggagcatgcttatcaggct
acagtcgctcgttattctcctaatggtgaatggatcgcttctgctgatgtttcaggtact
gttcggatctgggggacccataatgacttcgttcttaagaaagagtttcgggtactatcg
ggtcggatcgatgaccttcaatggtctcctgatggaatgcgcattgttgcttgtggtgat
ggcaagggaaaatcacttgttcgtgccttcatgtgggactcaggaacaaatgtgggtgaa
tttgatggccattcaaggagagttttgagttgcgcttttaaacccacaagaccattccgc
atagccacttgcggcgaagacttcttaatgaacttttatgaaggaccaccatttaaattc
aagctgtctcacagggagcattcaaattttgtcaattgtttgaggttctctccagacgga
agcaaacttatcagtgtaagctcggacaagaagggcattatttatgatgccaaaacagga
gatataattggagagctgtcatctgagggtggtcatcaaggaagtatatatgctgttagt
tggagtcccgatagtaaacaggtgctcacagtctctgctgataagtcagcaaaagtatgg
gatatatctgatgatggaaaagggaaagtgaagaaaacactggcttctcctggttctggt
ggagttgaggacatgctagttgggtgtctctggcaaaatgaccatcttgttactgtttct
cttggtggaactatttccatattctcagcaagtgatctggaaaaacctcccgtgtcattt
tctgggcacatgaaaaatgttaattccttagctgtcctcagaagtgacccgaaaatcata
ttgtccaccagttatgatggtttgattgttaaatggattcaaggcattggatatagtggg
aaattagaccgaaaggtgacttctcaaatcaaatgctttgcagttgtggaaggagaactt
gtgtcatgtgcgttcgacaacaagatctggagagtatctctgcttggagatcaatgtgga
gatgcaaattctatagatgttggcacccagcctaaggacttaagccttgcccttaattct
cctgaagtgactttagtttcgtttgaaactggagtcattcttctccgtggtacaaaagtg
ctgtcaaccataaaccttggatttacggtgacggcatctgttatttcacctgatggaact
gaagcaatagtgggtggtcaggatggtaaacttcatttttattccatcacgggtgatagt
ctcaatgaagaggttgtccttgaaaaacacaggggagctattaccattattcggtactct
ccagatgtttccatgtttgcatcagcagatgtgaaccgagaagctgtcgtctgggatcgt
gcatctcgcgaggttaaacttaataatatgttgtaccatactgcccgaataaattgcctg
gattggtcacctgataacacaatggtagctactggatccctagacacatgtgttataata
tatgacatcagcaagccagcatcgcatagaatcactattaaaggagctcatttgggtgga
gtatatggactggcttttactgatgaacgcagtatagtgagttctggcgaggatgcttgt
gttcgtgtatggggaatcactccacagtaa
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