Solanum pennellii: 107014369
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Entry
107014369 CDS
T04130
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107014369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107014369
Spliceosome [BR:
spen03041
]
Complex A
Other components
Complex A specific factors
107014369
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
RRM_5
eIF3g
zf-CCHC
PHD_4
RapA_C
KH_PNO1_2nd
RRM_7
RRM_10
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107014369
NCBI-ProteinID:
XP_015069735
UniProt:
A0ABM1GDW5
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All DBs
Position
3:complement(56677593..56683356)
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AA seq
772 aa
AA seq
DB search
MDSQSQSPAVETLDHNSSQNLASHDAQLQASDNSCPNQASEEQKLGEVTLKREIQRPLLS
ENGLTNTHSGTDRDQSGGEEETSSRRRRRSRWDPPPTELTNDGTGGGDGSGTGRKRKSRW
ADDEPKPVIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRKLQSGMPLDDRPEGARSPSP
EPIYDNMGIRINTREFRAREKLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMK
EFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGRFQQKGNLKPDPADNEDLH
VLVEAENQESVEAAAAMVEKLLQPVDEVLNEHKRQQLKELAALNGTIRDEEFCRLCGEPG
HRQYACPSRTTTFKSEVLCKICGDGGHPTIDCPVKNTTGKKMDDEYQNFLTELGGTIPES
LTKQSSATLALGAGNSGSNPPWASNNSAGGAGASSHPGLGSSILKPKEFDETNLYIGYLP
PTLEDDGLINLFSSFGTIVMAKVIKDRLSGLSKGYGFVKFADVQQANSAITSMNGHRLDG
RTIAVRVAGKPPQPAVPPGPVPAMPSYPVPNQSMGTYPSQQYAAGGPIGNDPPGSYPPPG
APVPWGPPVPPPYAQYPPPPPGAAMYPPVAGQPIPPYGMQYPPSIPAASSGAPAQTVSSG
ENQQTFTSPGEAQQSYPPEMQSQNVYGNSVTTMPPNAQPAYPTSSYSYPSYYGVAPPPPP
PSASHSNGNHSQGMSNVPWAPNPPTHAPPSSAEKHAYGADAEYEKFMSEMKS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaatctcaatctcccgcagttgaaaccctagatcacaactcatcacaaaac
ctagcttcccatgatgcccagcttcaggcgtctgataattcctgtccaaatcaagcatca
gaggagcaaaaactcggtgaagtcactctgaagcgcgagattcagaggccgttattgtcg
gaaaacggattgacaaacactcacagcggcaccgacagggatcaatcaggcggtgaggaa
gaaactagcagtagaaggagacggaggagccgttgggatccacctcccactgaattaacc
aatgatgggaccggcggcggtgatggaagtgggactggaagaaagaggaagtcgaggtgg
gctgacgatgagcccaaacccgttattcaattgccggatttcatgaaagatttcactgga
ggtattgaatttgatcctgaaattcaagctcttaatagtagattacttgaaattagtagg
aaattgcaatcgggtatgcccttggatgatagacctgaaggtgctaggtcgccttcgcct
gaacctatatatgataatatgggaattcgtataaacaccagggagtttcgcgcacgagaa
aagttgaatagggagagacaagagattatatcacaaatcattaagaagaaccctgctttt
aaacctcctgctgattataggcctcctaagcttcaaaagaagctctacattcccatgaag
gagttccctggttataattttattgggctgattattggtccaagagggaatactcagaag
aggatggaaaaggagacgggagcaaagattgtaattcgaggcaaagggtctatcaaggag
ggtaggttccagcaaaaggggaatttgaaacctgaccctgctgacaatgaagatttacat
gtgttggtggaagctgagaaccaggagtccgttgaagctgctgccgctatggtggagaag
ctcttgcagcctgttgatgaagtgctcaatgaacataagaggcaacaacttaaggaactt
gctgctttgaatggaacaattagagatgaggagttttgtaggctatgtggtgaaccaggg
cataggcagtatgcatgtccttctcgcaccaccacctttaagagtgaagttctctgtaaa
atatgtggtgatgggggacatcctactatcgattgtccagtgaaaaatactaccggcaag
aaaatggatgatgagtaccagaattttctgacagagttgggaggtactattcctgaatca
ttaacaaagcaaagctcagcaacgctagctctaggcgcgggaaactcaggaagcaatcct
ccttgggcaagcaataacagtgctggtggtgctggtgccagttcacatcctggcttaggg
tcaagcatactaaagccaaaggagtttgacgagacaaacttgtacataggttacttgcca
cctactcttgaagatgacggtttgatcaatttattctcttcatttggtaccattgtgatg
gctaaagttataaaggatcgtctaagtggtctgagtaaaggttatggattcgttaagttt
gcggatgttcaacaagctaatagtgctataactagcatgaatggccaccgtcttgatgga
agaaccattgctgtgagagttgcaggtaagccgcctcagcctgctgtgcctccaggacct
gttccggcaatgccttcatacccggttcctaatcagagcatggggacatatccgtcccag
cagtatgcagctggtggtcccattggcaatgatcctcctggtagctatcccccacctggt
gctccagttccatggggaccacctgtgcctccgccatatgcccagtacccacctcctcct
cctggagcagccatgtatcctcctgtcgcaggtcaacccatccctccatatggaatgcag
tatcctccttcaattccagcagcatcttctggtgcccctgctcagactgtttcttctggt
gaaaaccaacaaactttcacatctcctggtgaggcacaacaaagctatcctcctgaaatg
caatctcagaatgtgtatggtaactctgtcacaacaatgccacctaatgctcagcctgca
tatccaacatcatcatacagctatccatcttattatggtgtcgcaccaccaccccctcct
ccatctgcatcccactccaatgggaaccattcacagggtatgagtaatgttccctgggct
ccaaatccaccaactcatgcacctccatcatcagcggagaagcatgcctatggtgcggat
gcagaatatgaaaagttcatgtcagaaatgaagtcatga
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