Solanum pennellii: 107014401
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Entry
107014401 CDS
T04130
Name
(RefSeq) eukaryotic translation initiation factor 5B-like isoform X1
KO
K03243
translation initiation factor 5B
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spen03012
]
107014401
Translation factors [BR:
spen03012
]
Eukaryotic type
Initiation factors
eIF-5
107014401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
107014401
NCBI-ProteinID:
XP_015069779
UniProt:
A0ABM1GE03
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Position
3:31604853..31615133
Genome browser
AA seq
1308 aa
AA seq
DB search
MGRKKTTEENPEPPKHGGGGGKSKKKNRVIDDDEYSVQTEEPTVQEDTVLDDDERKKPAK
QGGGKSRKKNVVIDDDEYTVATEEPVVLEEKVILGGKKKAKKGKKGASNYGEDLTRDNDQ
EDEGIAPFSGKLNKSKQGKARASVFSTVFDTIGDEESEEDIEPVVAGGMGKTIGNSFSVA
LLDEEEEADTSVSKFETETVEEDDAPELIFAGKKKSSKKKKKIAVKEEDEPEQASQAVNP
EEEADDDESKKQQRDVPETSKNKTKKKKGGRTVQEDEDEIDKILAELGEEAAPAPSEEKV
QTQLESKDNKSKKKKSGRTAQEEDDIDKILAEIGEGPPATSAPTPSSLAQEEKGQLQPQL
GDAAADKEAIEEGAMESAAAKKKKKKKEKEKEKKAAAAASSVEEKQEETKNDAKGKLADK
KQSKQVREMQERLKKMKETEERKKREEEEKLRKEEEERRLQEELEKLAEEKKRLKKEREK
EKLLKKKQEGKLLTGKQKEEARRLEAMRKQFLANGGTLPTGENKKETTKRPIYQTKKSKP
QAQANDKTQEESIEISEVKEHHQEIVSEVDSVETEKVEDVDSTITEEKSEIADAEENEVE
EEEEDDEEWDAKSWDDADLKLPGKSAFEDDEVDSEPQPITKKEIKVASSAVHGAATLPVA
AKSVIPTQKTAATVTGPLKNDRSRKGEPEDRNVEQNKQKGSPEEPGAPNQNEDNLRSPIC
CIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVP
GLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALN
KVDRLYGWKVCKNAPIVKAMKQQSKDVQFEYNTRLTQIVTQFKEQGINTELYYKNKEMGK
DSFSIVPTSAISGEGIPDMLLLLVQWTQKTMIERLTYSNVVQCTVLEVKVVEGHGTTIDV
VLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKKIKAAQGIKITA
QGFEHAIAGTSLYVVGPDDDVEDIKEAAMEDMKSVMSRIDKSGEGVYVQASTLGSLEALL
EFLKTPEVSIPVSGIGIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTQEARELSDELG
VKVFMADIIYHLFDQFKAYIDTIKEEKKKEVAEEAVFPCVLKIVPNCVFNKKDPIVLGVD
VLEGIVRIGSPICIPQKEFIDIGRIASIENNHKPVDSAKKGQRVAIKIVGFNPEEQQKMF
GRHFEMEDELVSKISRRSIDILKANFRKDLSVEDWRLVMKLKTLFKIQ
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaagaagacaacagaagagaaccctgaacctcccaagcacggcggtggagga
gggaagtccaagaagaagaatcgagtgattgacgatgatgagtactctgtccagactgaa
gaacctacagttcaggaagatacagtacttgatgatgatgagagaaagaagccggccaag
cagggtggtggtaagtcaaggaagaagaatgtggtaattgatgatgatgaatacactgtt
gcgacagaggaacctgtcgttctggaagaaaaagtaatacttggtgggaagaaaaaagct
aaaaaggggaagaagggtgcctctaattatggagaggatttaacaagggataatgatcaa
gaggatgaaggcattgcccccttctctgggaaactgaacaagtcaaagcagggaaaagcc
cgtgctagtgtgttttctacagtttttgatacaattggtgatgaagagtccgaggaagat
atagagcctgtcgttgctggtggtatggggaagactattggcaattcatttagtgtcgcg
cttcttgatgaagaagaggaggcagatacttctgtttctaagtttgagacagagacagtt
gaagaggatgatgcgccagaacttatttttgcaggtaaaaagaagtcatctaagaagaag
aaaaaaattgctgttaaggaagaagatgaaccagaacaagctagccaagcggttaaccct
gaagaagaagctgatgatgatgaaagcaaaaagcagcaaagagatgtaccagaaacttct
aagaataaaaccaagaagaaaaagggtggtcgtacagttcaagaagatgaggatgagatt
gacaagattctagcagaacttggtgaagaagctgctcctgcaccgtctgaagagaaagta
cagactcagctggagtcaaaagataataaatctaagaagaaaaagagtggtagaacggct
caagaggaggatgacattgacaaaattctggcagaaattggtgaagggccaccagctaca
tctgcacctactccttcttctcttgcacaagaggagaaaggccaattgcagcctcaacta
ggtgatgctgctgctgataaggaagcaattgaagaaggagctatggagtctgctgctgca
aagaagaagaaaaagaagaaggagaaggaaaaagaaaaaaaggcagctgctgctgcctct
agtgtagaggaaaagcaggaagaaacaaaaaatgacgcaaaagggaaattggctgataag
aaacagtcaaagcaggttagggagatgcaagagagactcaaaaagatgaaggaaactgaa
gaaaggaagaagagggaagaggaggagaagttaaggaaggaagaagaggaacggcgtctt
caggaagagctagaaaaacttgcagaagagaagaaacgtttgaaaaaggagagagaaaag
gaaaagctcttgaagaagaaacaagaggggaaactgcttacaggaaagcaaaaggaagaa
gctcgaagattagaagcaatgaggaaacaatttcttgctaatggtgggacactccccact
ggggagaataagaaagagacaaccaaacggccaatttatcaaacgaagaagtcaaaacca
caagctcaggctaatgacaaaacgcaggaagagtctattgaaatatcagaagttaaagaa
catcatcaggagattgtgtcagaggttgattctgtggaaactgagaaagttgaggatgtg
gattcgacaattaccgaggaaaagtcagaaatagctgatgcagaagaaaatgaagttgaa
gaagaagaggaagatgatgaagaatgggatgcaaaaagttgggatgatgctgatctgaaa
ctgcctggtaagagtgcttttgaagatgacgaggtagattcagaaccgcagcctataact
aagaaagagattaaggttgcaagttcagctgttcatggtgcagcgactctgcctgttgct
gccaagtcggtgattcctactcaaaaaactgctgcaactgtaacaggtccactgaagaat
gaccgaagtaggaagggtgagcctgaggataggaatgtagagcaaaataagcagaaaggc
agtcctgaagaacctggtgctcctaaccagaatgaagacaatctccggtctcctatttgc
tgtattatggggcatgttgatactggtaaaaccaagctacttgattgcatacgaggcacc
aatgttcaagaaggtgaagctggagggattactcagcagataggtgccacttactttcca
gctgagaatatacgtgagagaactaaggagctcaaagctgatgcgaagctgaaggtccct
ggtttgttggtcatcgacactcctggacatgaatctttcacgaatctgcgttctcgaggt
tcaggcttatgtgatattgcaattttggttgttgacatcatgcatggactagaaccacag
accatagagtcacttaatcttcttaagatgaggaacacagaatttattgttgctctgaat
aaggtggataggctttatggatggaaagtttgcaaaaatgctcccattgtgaaggcgatg
aaacaacagtccaaagatgttcaatttgaatataatacgaggcttactcagattgttacc
cagttcaaggaacagggcataaatacagaattgtactataaaaacaaagaaatggggaag
gacagtttcagtattgtaccaactagtgctattagtggtgagggtattcctgacatgctg
ttgttacttgttcaatggacacaaaagacaatgattgagaggcttacttacagcaatgtg
gttcagtgcacggtgttggaggttaaggttgttgaagggcatggaacgactattgacgtg
gttttggttaatggtgttcttcatgaaggagatcagattgtcgtttgtggcatgcaggga
cccatcgttaccacaatcagagcactactaacgcctcaccccatgaaggaactccgagta
aagggaacatatttgcatcataagaaaatcaaggctgcccagggtataaagataaccgcc
cagggttttgagcatgcaattgctggaactagtctatatgttgtggggcctgatgatgat
gtggaagacatcaaagaagcagctatggaagatatgaagtcagtgatgagcaggatcgac
aaaagtggagagggagtatatgttcaagcatctacacttggatcattggaagctttgctg
gaatttttgaagaccccagaagtaagcatacctgtcagtggtattggcataggtcctgtg
cataaaaaggatgtcatgaaagctagtgttatgcttgagaagaagaaagagtatgcaacc
attttggcctttgatgttaaagtgacacaggaagctcgggaactttcagatgaacttggt
gtcaaggtttttatggctgatattatatatcatctatttgatcagtttaaagcctacatt
gacactatcaaggaagaaaaaaagaaggaagttgctgaagaagcagtcttcccatgtgtg
ctcaagatcgtaccgaattgtgtcttcaacaagaaggatccaattgttctgggagttgat
gttcttgaaggcattgtaaggattggatctcctatatgtattcctcaaaaggagttcatt
gatattggtcgtattgcatccattgagaacaaccataagcctgttgactctgcaaagaaa
ggccaaagggtggccattaagatagttggatttaaccctgaggagcaacaaaagatgttt
ggtaggcattttgaaatggaagatgagcttgtcagcaaaatttcaaggaggtctattgac
atactcaaggccaatttccggaaagacctctcagttgaggattggagacttgtcatgaaa
ttgaagaccctctttaagatacaatga
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