KEGG   Solanum pennellii: 107014475
Entry
107014475         CDS       T04130                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
spen  Solanum pennellii
Pathway
spen03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107014475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107014475
Enzymes [BR:spen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107014475
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     107014475
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 107014475
NCBI-ProteinID: XP_015069884
UniProt: A0ABM1GE92
LinkDB
Position
3:65769568..65780289
AA seq 1217 aa
MTISDIMEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKE
LGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR
GDGDWKHASVKFGKVTLERPKFWAGEKFSVDGGKEYLDLLPRHARLQNMTYSARIMVETH
VQVYTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEF
DHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHI
KGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNC
EDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHS
FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHY
LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGK
VGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVD
DCSTSLHGKQKVLLDGEWVGVCEDSALFLSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS
DPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKA
DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR
VDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ
EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLD
DDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR
QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA
ALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIFMGP
TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE
RLFTLSDSSQMHICGKCKNMANVIQRTVQGGKVRGPFCRFCESVEDIVKVNVPYGAKLLC
QELFSMGISLKFDTEIC
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgacaatttctgacatcatggaagaagtgggatgtagtagtggtaaagagaagatatcc
aatggatcaacaaggatggattttgatattgatgatctttttgaagtagatgatgatgat
tgggacgaggatgaagatgaagatgaggatgatagccatgatatggttttaattaaagag
ttgggtgaaagttttttgaagaacttctgtaaaaaggcatcaactggtttttttgagaag
tatggtttaatcagtcaccagattaattcatataatgacttcatcaactatggaatccaa
agggtgtttgactcggttggggagatccatgttgagccaggttatgatccatcaaagaga
ggtgatggtgattggaagcatgcttctgtgaaattcgggaaagtaacccttgagcgcccg
aagttttgggctggggaaaagttttctgtggatggtgggaaagagtacctggacttgttg
ccacggcatgctcgcctccagaacatgacatattctgccaggattatggttgagactcat
gttcaggtgtataccaaaaagctagttagaagtgacaagttcaaaactggcgtagaccgg
tttgtcgacaaggagtgtgaagtggaagacaaaagggatgtcttgattgggagaatccct
gtgatggttaactcagaattgtgctggatgaatggcgttgacaagcttgactgtgaattt
gatcatgggggatacttcattgtcaaaggggctgaaaagaccttcattgcacaagagcag
ctttgtttaaaaaggctctgggtgtcaaacaatcctacttggatggttggatatcgccca
ggtgaaaaaaggaagagagtctacattaaactgactgagaccttgaagcttgagcacatt
aagggaggagaaaaagccctcagtgtatacatccttgcagaaatgccaatttgggtcttg
ttttttgctctaggtgtttcctccgacagggaggtagtaaatttaattgatgtggatatt
gaagatactactattgtcaatatactagtagcttccatccatgaggctgataagaattgt
gaggatttcaggaaggggaaaaaggctcttgcttatgttgacagacttataaagaattgt
aaatttccacctcaagaatctgttgaggagtgcataaatgcgtacctgttccctaatctt
agtggtttcaagcagaaggctcgcttccttggctatatggtaaaatgcctcttgcactct
ttcattggtcgcagaaaggttgacaacagagatgattttcgaaacaagagattggagctg
gctggtgagctcctagaacgagagctcagggcacacattaaacatgctgagaggcgtatg
gtgaaggcaatgcaaagagatctttatggagatcgacaagtgcagccaattgagcattac
ttggatgcatcaataattaccaatggtctctccagggctttttccactgggcattggtgt
cacccttacaagagaatggagagggtttccggtgtagttgcaactcttagacgaacaaat
ccattgcaaatgactgctgatatgaggaaatcacgtcagcaggttacatacaccgggaag
gttggcgatgctagatacccacatccttcacactggggaaagctatgttttctatctacc
ccagatggagaaaattgtggcctggtgaaaaatttggctagtatgggtcttgtcagcaca
attattttgaaaccatttcttgagacattgttccggtgtgggatgcaaaagttagtcgac
gattgttccacctcactccatggaaagcaaaaggtactacttgatggggagtgggttgga
gtatgtgaagattctgcactcttcctttcaaagctaagacgtaagcgccgcaggaatgaa
gtgccacaccaggttgaagttaagagagatgagctgcagggtgaagttcgcatattttct
gatcctggaagaattctgcgtcctcttcttgttgtttcaaatctaaagaaaatcaaagct
ttgaaagggggagattatggctttcaatctcttctggacaatgggattattgagcttata
ggacctgaagaagaagaagactgtcgaactgcatggggagttgagtacatcttaaaagca
gataaagagaacccacctgctaagtatactcattgtgagttggacatgtcattcctatta
ggcttgagctgtggtattatcccatttgcaaaccatgatcatgctaggagggtcctctat
caatctgagaagcactctcagcaggcaattgggttttcaacagtgaatccaaacaataga
gttgatacaaatacccatcaactgtattatcctcagaggccactcttccggacaatgttg
gcagattcccttgggaaaccaaaatgtgctcagtaccagaaaggaatgcttccacggcct
gaatacttcaatgggcaatgtgcaattgtcgcagtaaatgttcaccttggctataaccaa
gaagattcattggtcatgaatcgtgcttcactggagcggggaatgtttcgatctgagcat
gttaggagctataaggctgaggttgacaataaggaagcaatggctaagaagctaaagatt
gaggactctgtcaactttggaaaaacccagagtaaaattggacgagtggacagcctagat
gatgatggttttccattcattggggcaaatctccagagtggagatatcattattgggaaa
ttttctgaatcaggggctgatcacagtgtcaagctgaagcatacggaaaggggcatggtt
cagaaggttttgctctctgctaatgatgaagggaagaactttgctgttgtatctctcaga
caagttcgttctccatgtcttggagacaagttctccagcatgcatggacaaaagggtgtc
cttggatttctggaatctcaggaaaacttcccttttacaattcaggggattgttccagat
attgtaatcaatccccatgcatttccttccaggcaaacccctggtcagctgctagaagct
gctctggggaagggcattgctctaggtggtggtcaaaaatatgccactcccttctccact
ttatcagttgatgccataatggagcagcttcaggggcgaggatttacaagatggggaaat
gagagagtttacaacggtcggacaggtgaaatggttcattccctgattttcatgggccca
acattctaccaacgcctcatccatatggctgaagacaaggtgaaattccgtaacactgga
cctgtccatccccttactcgccaacctgtggcagacagaaaacgctttggtggaattaag
tttggtgaaatggagcgtgactgtcttatagctcatggtgctgcagcaaatctgcatgaa
cgccttttcacactcagtgactcttcccagatgcacatatgtggtaagtgcaagaacatg
gcaaatgtaatccagagaactgtgcaaggtggtaaggtaaggggtccattttgccggttc
tgtgaatcagtcgaagatattgtgaaagttaatgtgccatatggtgcaaagttgttgtgc
caggagctcttcagcatgggcatatctctcaagtttgacactgagatttgctaa

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