Solanum pennellii: 107014481
Help
Entry
107014481 CDS
T04130
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
spen
Solanum pennellii
Pathway
spen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107014481
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107014481
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107014481
03036 Chromosome and associated proteins [BR:
spen03036
]
107014481
Peptidases and inhibitors [BR:
spen01002
]
Metallo peptidases
Family M1
107014481
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107014481
Coactivators
SAGA/TFTC/STAGA complex
107014481
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107014481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
107014481
NCBI-ProteinID:
XP_015069894
LinkDB
All DBs
Position
3:complement(72924562..72939188)
Genome browser
AA seq
1509 aa
AA seq
DB search
MAKPRKGKNEEQKGDNSEAVVRHQKLCLSIDMDKRRIYGYTELDVIVPENGILGLHADNL
VIDSVTVDGEPTEFEVFPHYLALENGDRWCAVSSATSAADAAGSVYLSHLDRELLSNLLI
MCKKPVEHDIERQEMHLENGVNSSAENNQNVKKVRIDYWVEKAETGIHFDGDVLHTDSQI
RRARCWFPCMDDNLQCCCYDLEFTVASNLVAVSTGSLLYQIWTKDVPARKTFVYRLSTPV
NARWISLAVAPFEILPDSNITHLSHICLPADLTKLRHTVGFFHSAFSFYEDYLSASFPFG
SYTQVFIPPEIAISSASIGAALSIFSSQFLFDGKVINKTIDTRIKLAYALARQWFGVYIT
PEAPNDDWLLDGLAGFLTDMFIKRFLGNNEARYRRYKANIAVCRADDSGATALSAVAASK
NLYGTQCIGLFGKIRSWKSVAILQMLEKQMGPESFRKILQQIVARAQDVNRLLRTLSTKE
FRHLANKVGNLERPFLKEFFPRWVGSCGCPVLKMGFSYNKRKNMVELAILRECTARFDLG
DTMSNGKPDSEKQEGDGWPGMMSIRVHELDGMYDHPILPMTGEPWQLLEFQCHSRLAAKR
FQKTKKSSKPDGSDDNGDTVANVDMRATSDSPLLWLRADPELEYLAEIHLNQPVQMWINQ
LEKDRDVVAQAQAIATLEALPHLSFSVVNALNNFLGDSKAFWRNRIEAAFALAGTASEET
DWAGLTHLVAFYKARRFDANIGLPKPNDFLDFQEYFVLEAIPHAIAMVRAADQKSPREAV
EFVLQLLKYNDNSGNPYSDVFWLAALVQSIGELEFGQQSIVYLSSLLKRVDRLLQFDRLM
PSYNGILTISCIRSLTQIALKLSEFVPLDRVIELINPFRTSKTLWKVRVEASRSLLDLEF
QRNGIDAALALFIRYLDEEPTLRGQVKLGVHAMRLCQIRNESDFDSDVKGETLVALLRLL
ESPISFNNVILRHYLFCILQVLARRAPTLYGVPKDETLRMGHAAFCSNLKNIFADLVKQS
KPPEFPLENLEDILDDSAIADALPGNENAKGATISVPDSLFVSEVQKNTEDALLSNEIIN
TATGSIPDSLVVTEVQNETDLLNYRHGVMHLVGDLPLASSADPFREEPVLPDNEQTKPMV
SLLHETGGMSMGPPTTDNLGSRDQGQPVINLGRDNPGISEPNREPDAVSASLERKKPVFK
IKVRKTVTSSRAEDNENVTVDKSQDGFHEVDRGASSSVSVDAPQRNVVELLSSGGNQFPE
DVNSCHDVGSHVTASIGSAKVAVEVEELTKELQCTAESSKVSLVPQLDDHLLADITRVDD
PEAEPHKYASLHSLTMPNLPVHGKVKEKKKDKGKKRKVEGRKDDPEYLERKRLKKEKKRK
EKELAKILKDEAKASTSLESRRKNEQRGTKAETIRNDHKLSLVEQEDGRKDEAEPRQVVN
GAEAKATSSGFSGRNEDIGAKGASLQLKPGGSSGVMLNVDRGDTSVNAAPPTSSHKFKIR
IKNRTLGKS
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgaaaagggaagaacgaagaacagaaaggggataattctgaagcagtc
gttcgtcatcagaaactatgtctctcaattgacatggacaagcgtcgaatttacggttac
acagagcttgatgtaattgtaccagaaaatggaattttgggcttgcacgcggataatttg
gtgatagacagtgttacagttgatggggagcctacagaatttgaagttttcccgcactat
ttagcattagaaaatggggatagatggtgcgctgtatcatcagctacttcagctgctgat
gcggctggttcagtttacttgtcacatctagatagagaattgctgtcaaatttgctgatc
atgtgcaaaaaacccgtggagcatgatattgaaagacaggaaatgcatttagagaatgga
gtgaactcttcagctgaaaataatcagaatgttaagaaggtccgtattgattattgggta
gagaaagccgaaaccggaatccactttgatggtgatgttttacatactgacagccaaatt
cggcgtgcacgatgttggttcccctgcatggatgacaatttacaatgttgctgctatgat
ttggaattcacagtggccagtaatcttgtggctgttagtactggaagcttactttatcag
atctggaccaaggatgttcctgcacgtaaaacttttgtctacagactaagtactcctgtt
aatgcacgatggatatcattggcagtcgcaccatttgaaattcttcccgactccaatatt
actcatctctcacatatttgtctacctgctgacttaacaaagctgcggcatactgtagga
ttttttcacagtgcttttagcttctatgaggactacctttctgcatcatttccattcggg
tcatacacacaagtttttattcctcctgagatagcaatatcctcagcgagtataggagcc
gccttgagcatcttcagctctcaattcctattcgacgggaaggtcattaataagactata
gatacaaggattaaacttgcttatgcccttgcaagacaatggtttggagtgtatatcacc
ccagaagcgccaaatgatgattggttgttggatggtcttgctggtttcttgactgatatg
ttcatcaagagatttcttggcaataatgaagcacgctataggagatacaaggctaatatt
gctgtttgcagagcagatgatagtggtgcaactgccttaagtgctgttgctgcttcaaaa
aatttgtatggcacccagtgcattggtttatttggaaaaataagatcttggaagtctgtt
gcgattctccaaatgttagaaaaacagatgggacctgagtcatttcgcaagattcttcag
caaattgttgcccgggctcaagatgtaaatcggttgttgagaacccttagcacaaaagag
ttccggcaccttgccaacaaggttggtaatcttgaacgcccatttcttaaagaattcttt
ccacgttgggtcggatcatgtggctgtccagtgctgaagatgggattctcatataacaaa
agaaagaatatggtcgagttagcaatattgagggaatgcaccgctagattcgacttaggt
gatactatgagtaatggtaagcctgattcagaaaaacaagaaggcgatgggtggcctggc
atgatgagcatacgggtgcatgagcttgatggcatgtatgaccatccaattcttcctatg
actggtgaaccctggcagctgcttgaatttcagtgtcattctagacttgcagcaaaacgg
tttcaaaaaaccaaaaagagttctaaacctgatggttcagatgataatggtgacactgtg
gctaatgtagatatgcgtgcaacctctgattcaccattgttgtggctccgggcagatcct
gaattggagtatcttgctgaaattcatttaaatcaaccggtccagatgtggataaatcaa
ttggagaaggacagagatgtggtcgctcaggcgcaagctatagcaacattagaagcatta
ccacatctttctttttcagttgttaatgctctcaacaacttccttggtgactctaaggcc
ttttggaggaatcgaatagaggcagcatttgctttggccggtacagcatcagaggaaact
gattgggctggcttgactcatcttgttgcattttataaagctcgaagatttgatgccaat
attggacttcccaagccaaatgacttccttgatttccaggagtactttgtacttgaggct
attccacatgctatagctatggttcgagcagctgaccagaaaagccctagggaagctgtt
gaatttgttctacaacttctgaagtacaacgacaacagtgggaacccctactctgatgtg
ttttggcttgctgctttagttcagtccattggtgagcttgaatttggacaacagagcatt
gtgtatttatcatcccttctcaagcgagttgatcggctcttgcaatttgacaggttgatg
ccaagttacaatggtattttgacaattagctgcatccggtctttgacacaaattgcacta
aagctgtcagagtttgttcctcttgatcgtgtcattgagctcattaatccattccgaact
tcgaagacactctggaaagttcgggttgaagcaagcagatcacttcttgatcttgaattc
cagcgcaatgggattgatgctgcattggcattgtttattagatatttggatgaagagcca
actttaagaggtcaagtgaagttaggtgtgcatgccatgcgtttatgtcagattagaaat
gaatctgattttgacagtgatgtgaagggtgaaactcttgttgctttattgcgcctgctt
gagagcccaatctcgtttaacaatgttattcttcgtcattacttgttctgcatcttacaa
gtcctcgctcgaagagcgccgacactgtatggagtgccaaaagatgaaactttgaggatg
gggcatgccgcattttgcagcaatcttaagaatattttcgctgatcttgtcaaacaatct
aagcctcctgaatttcctctggagaaccttgaagatattcttgatgattcagccattgca
gatgcgcttcctggcaatgaaaatgcaaaaggtgctactatctcagtacctgatagttta
tttgtatcagaggtccagaaaaacacggaggatgctctattgagtaatgaaattataaac
actgctactggttctatacctgatagtttggttgttacagaggtccagaatgagacagat
ttgctgaattataggcatggagtaatgcatctggtgggtgacctcccactggctagctct
gcggatccttttagagaagaacctgtcttacctgacaatgagcaaacaaagccaatggtg
agcctgttacatgagactggaggtatgtccatgggccccccaacaaccgataaccttggc
agccgtgatcaagggcagccagtaatcaatcttggacgagataatccaggaatttctgaa
cctaacagagaacctgatgctgtttctgcaagtcttgaaagaaagaagcctgttttcaag
attaaagtgagaaaaactgtcacatcttctcgagctgaggataatgaaaatgtaactgtg
gacaaatctcaagatggttttcatgaagttgaccgtggggcaagtagctcagtttctgtt
gatgcacctcaaagaaatgttgttgaattgttaagcagtggcggtaaccagttccctgag
gatgttaactcttgtcatgatgttggatctcatgttactgccagcattggaagtgccaaa
gttgctgttgaagttgaagagctaacaaaggagttgcagtgcactgctgagtcgagcaaa
gtttctttggtgccacaacttgatgatcacttattagcggatatcacaagagttgatgat
cctgaggctgaaccacataaatatgcaagtttgcactcgctgactatgcctaaccttcca
gttcacggcaaagtgaaggaaaagaagaaagacaaaggaaagaaacgaaaggtggagggg
cgcaaagatgacccagagtacttggagcggaaaaggttaaagaaggagaagaaacggaag
gagaaggagttagcaaagattttgaaagacgaggcaaaggcttcaacatccttggagagt
cggaggaagaatgagcagcgaggcaccaaagcagagacaatcaggaatgatcataagtta
agtttagtagagcaagaagatggtagaaaagatgaagctgaacccagacaagtggtgaat
ggtgcagaagcaaaggcaacgtcttcaggcttttctggtagaaacgaggatatcggggct
aaaggagcaagcttgcaattgaaacccgggggctctagtggggtgatgttaaatgtagat
agaggcgatacgagtgtaaatgctgcgccacctacttcttcacataagttcaaaatcagg
attaaaaaccgaacgcttggtaaatcatga
DBGET
integrated database retrieval system
