KEGG   Solanum pennellii: 107014556
Entry
107014556         CDS       T04130                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107014556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107014556
Spliceosome [BR:spen03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107014556
 Complex B
    107014556
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 107014556
NCBI-ProteinID: XP_027771456
LinkDB
Position
3:2806082..2823542
AA seq 982 aa
MSARKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQADNTPGSKAFVRGGTINPNDK
LKMDSQGGNSKDEGSGLKKGSRYVPSFLPPPMATKGRDHEKKQKEDKPREKEKGKARNID
NFMEELKHEQEMRERRNQDREQWRDRHTENSAPSSRFDELPDDFDPSGRPGSFDDGDPQT
TNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADAQA
AKDEMEGVIVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTT
VPGQNSELVLTPNVPDIMVIPPEDDHMRHVIDTMALCVLDGGCAFEQAIMERGRGNPLFS
FLFELGSKEHTYYVWRLYSFAQGDTLQRWRTVPFIMITGSGRWIPPSLPTPKGADHEKEA
GSTYAAGRSRRVDVERTLTDAQRDEFEDMLRSLTLERSQIKEAMGFSLDNADAAGEVVEV
LTESLTLKETPIPTKVSRLMLVSDILHNSSAPVKNASAYRTKFEASLPDIMESFNDLYRS
ITGRITAEALKVIVHVTYLTCTCYIFCILFLLLFNVWLIFPCMLQERVLKVLQVWADWFL
FSDAYVNGLRATFLRTGNSGVTPFHSLCGDTPDVEQRTSSDDAGDGGKVNPDGALAIGKG
AAMKELLSLPLTELERRCRHNGLSIVGGREMMVARLLYLEEAEKQRGHELDEDLKFASHS
SSARFPSTRKDSNLELDRMAPSERNSQMDYDVQLKQRESVSSHQTNSAPHYNSIDFSSDG
KSETILPTSKWAREDDESDDEQKRSSRDLGLTYSSSGSENAGDGLSKIKDAELTMDTGNS
AYPESGMNEELRQKLRRLEVALIEYRESLEEQGIKNPDEIERKVEIHRQCLQSEYGLLNF
SEDTSKKGGRSSSERREKRDDAREASRKRQRSRSRSGSPQWKSSSRDRDSDREKRRDRGR
KSGSRERDDHDRDKSRERRRAR
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgagtgctcggaagaagacccctttccagaagcatagagaagaggaagaggcaaagaaa
aagagggcagaagatgaaacagctcgtctgtatcaagagttcgtggaatcgttccaagcg
gacaatacaccaggttctaaggcatttgttagaggaggaaccatcaatccaaatgataaa
ttgaagatggattctcaaggtggaaattctaaagatgaggggtcaggtttaaagaaggga
agtaggtatgtgccttctttcttaccacctcctatggcaactaagggcagagatcatgag
aagaagcagaaggaggacaagccgagggaaaaagagaagggcaaggctaggaacattgat
aatttcatggaggaactgaaacatgagcaagaaatgagggaaaggcgtaaccaagaccgt
gaacagtggcgtgatcgtcatactgaaaattctgctccatctagtcggtttgatgaactg
cccgatgactttgatcctagtggaaggcctggatcatttgatgatggagacccacaaacg
acaaatctctacgtaggaaatctatcacctcaggttgatgagaattttcttttgcgcaca
tttgggagatttggccccattgcaagtgtaaaaataatgtggccaaggactgaagaggaa
agaaggcgacagaggaattgcggttttgtagctttcatgaatagagctgatgctcaggct
gcaaaagatgagatggaaggagttattgtttatgaatatgagttgaagattgggtggggt
aaatctgtctctctgccttctcaagcactccctgctcctcctccaggacatatggctatc
aggagtaaggagggtgcaactgttatcttatcgggtccatcaggtcctccagttacaact
gttccaggccagaattctgagttggttcttactccaaatgtacctgatattatggttatt
ccaccagaggatgatcatatgcgccatgttattgatactatggctctgtgtgttctcgac
ggaggttgtgcttttgaacaagccataatggagcgaggccgtggaaatcctctgttcagt
ttcttgtttgagcttggctcgaaggagcatacttactatgtttggaggctctattctttt
gctcagggagatactcttcaacggtggaggacagtacctttcatcatgataactggtagt
gggaggtggataccaccctctctaccaacaccgaaaggagctgatcatgaaaaagaagct
gggagcacatatgctgctggaagaagcaggcgagtggatgttgaacgaacattgactgat
gctcagagggatgaatttgaggatatgctccgttcattgacactagaaagaagtcaaata
aaagaagcaatgggtttttctttggacaacgctgatgctgctggagaggttgttgaagtt
ttgacagagtcgttgacacttaaggaaactccaataccaacaaaagtttctaggctcatg
cttgtctctgatattcttcataatagtagcgctcctgtgaagaatgcatctgcttatcgc
accaaattcgaagcctctttaccagacataatggaaagtttcaatgatctatatcgaagt
ataacagggcgaattactgccgaggcacttaaagtaattgtgcatgtcacctacttgact
tgcacttgctacatcttttgtatcctttttttgctcctctttaatgtgtggttaattttt
ccttgcatgttacaggagagagttctgaaagtgcttcaagtatgggctgattggtttttg
ttttcggatgcctatgtcaatggtttacgagctacctttcttcgaaccgggaactctggt
gtgacccccttccattctctgtgtggtgatacacctgacgtggagcaaaggaccagctct
gatgatgcaggtgatggcggcaaagttaacccagatggtgctttggcaattggcaaagga
gctgcgatgaaggaactgttgagccttccacttactgagctagaaagacgatgcaggcac
aatggtttatctatcgtaggtggtagggaaatgatggttgctcggttactttatctggaa
gaagctgaaaagcagaggggtcatgaactagatgaagatttgaaatttgcgagccattca
agttctgctaggtttcccagtactcggaaagatagcaaccttgagttggacaggatggct
ccttccgaacggaacagtcaaatggattatgacgtacaactcaaacaaagagagtctgta
tcttcacaccaaacaaattctgctccacactataattcaattgacttttccagtgacggc
aaaagtgagacaattttgcctacatctaaatgggccagagaggatgatgaaagtgatgat
gaacaaaagagaagttctagggacctggggttgacatattcatcttctggaagtgagaat
gctggcgatgggcttagcaagatcaaggatgcagagcttacaatggacacaggcaattca
gcatacccggaaagtggaatgaacgaagagttgaggcaaaagctgaggcgtcttgaggtt
gcattgattgaatatcgtgaatctcttgaagaacaaggaataaaaaatccggatgaaatt
gagaggaaagttgaaatccatcggcaatgcctacaatctgaatatggtttattgaatttc
agcgaagatacatcaaaaaaaggaggcaggtcatcttcggagaggagagagaaaagagac
gatgctcgtgaagcttctaggaagcggcagcgcagtcggagcagaagtggaagccctcag
tggaaatcatccagcagagaccgcgatagtgatagagaaaagcgtcgtgataggggaagg
aagagtggaagcagggagagagatgatcatgatagagacaaatctagggaaaggagacgg
gccagatga

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