Solanum pennellii: 107014634
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Entry
107014634 CDS
T04130
Name
(RefSeq) phytoene synthase 1, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
spen
Solanum pennellii
Pathway
spen00906
Carotenoid biosynthesis
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Module
spen_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107014634
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
spen01006
]
107014634
Enzymes [BR:
spen01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
107014634
Prenyltransferases [BR:
spen01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107014634
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
107014634
NCBI-ProteinID:
XP_027771458
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All DBs
Position
3:4514909..4520631
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AA seq
412 aa
AA seq
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MSVALLWVVSPCDVSNGTSFMESVREGNRFFDSSRHRNLVSNERINRGGGKQTNNGRKFS
VRSAILATPSGERTMTSEQMVYDVVLRQAALVKRQLRSTNELEVKPDIPIPGNLGLLSEA
YDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPAALDRW
ENRLEDVFNGRPFDMLDGALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYKNFDELYLYC
YYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLP
QDELAQAGLSDEDIFAGRVTDKWRIFMKKQIHRARKFFDEAEKGVTELSSASRFPVWASL
VLYRKILDEIEANDYNNFTKRAYVSKSKKLIALPIAYAKSLVPPTKTVSLQR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgccttgttatgggttgtttctccttgtgacgtctcaaatgggacaagtttc
atggaatcagtccgggagggaaaccgtttttttgattcatcgaggcataggaatttggtg
tccaatgagagaatcaatagaggtggtggaaagcaaactaataatggacggaaattttct
gtacggtctgctattttggctactccatctggtgaacggacgatgacatcggaacagatg
gtctatgatgtggttttgaggcaggcagccttggtgaagaggcagctgagatctaccaat
gagttagaagtgaagccggatatacctattccggggaatttgggcttgttgagtgaagca
tatgataggtgtggtgaagtatgtgcagagtatgcaaagacgtttaacttaggaactatg
ctaatgactcccgagagaagaagggctatctgggcaatatatgtatggtgcaggagaaca
gatgaacttgttgatggcccgaacgcatcatatattaccccggcagccttagataggtgg
gaaaataggctagaagatgttttcaatgggcggccatttgacatgctcgatggtgctttg
tccgatacagtttctaactttccagttgatattcagccattcagagatatgattgaagga
atgcgtatggacttgagaaaatcgagatacaaaaacttcgacgaactatacctttattgt
tattatgttgctggtacggttgggttgatgagtgttccaattatgggtatcgcccctgaa
tcaaaggcaacaacagagagcgtatataatgctgctttggctctggggatcgcaaatcaa
ttaactaacatactcagagatgttggagaagatgccagaagaggaagagtctacttgcct
caagatgaattagcacaggcaggtctatccgatgaagatatatttgctggaagggtaacc
gataaatggagaatctttatgaagaaacaaatacatagggcaagaaagttctttgatgag
gcagagaaaggcgtaacagaattgagctcagctagtagattccctgtatgggcatctttg
gtcttgtaccgcaaaatactagatgagattgaagccaatgactacaacaacttcacaaag
agagcatatgtgagcaaatcaaagaagttgattgcattacctattgcatatgcaaaatct
cttgtgcctcctacaaaaactgtctctcttcaaagataa
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