Solanum pennellii: 107014703
Help
Entry
107014703 CDS
T04130
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107014703
04121 Ubiquitin system [BR:
spen04121
]
107014703
Transcription factors [BR:
spen03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107014703
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
107014703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
RRM_R3HCC1L
R3H
Motif
Other DBs
NCBI-GeneID:
107014703
NCBI-ProteinID:
XP_015070225
UniProt:
A0ABM1GF42
LinkDB
All DBs
Position
3:71845944..71849920
Genome browser
AA seq
1125 aa
AA seq
DB search
MSFPAQNNRRNNNSNRPRNNNNNNNPVVQSGGARREWVARGSAPTNTVPFSAAPVTPVTT
TTVVTPGFGGNGRDNENVSSAPVNRFQNQNQTYGEPKFNRGMYRGRGRGSYNHQENRMER
PVREVSGRINQERVKDPNLPQLVQEIEEKLLKGNIECMICYDMVRRSAPMWSCSSCYSIF
HLHCTKKWARAPTSVDTSAEKNQRFNWRCPGCQSVQLTSSRDIRYLCFCGKRQDPPSDLY
LTPHSCGEPCGKKLEKELPGNGLSEEDLCPHVCVLQCHPGPCPPCKAFAPARSCPCGKEV
ITTRCSDRKSVLTCGQQCGKLLDCGRHRCEQTCHVGSCGHCQIVVDAYCFCKKKTESLLC
GDMGVKGDIKMEDGVFSCNSVCGKKLSCGNHICRELCHPGPCGDCALLPSKVKACCCGKT
SLEEERHSCLDPIPTCSKVCGKRLRCGVHRCEAVCHSGDCAPCLVPVTQRCRCGSTSRTV
ECYRTQAEDEQFTCDRPCGQKKNCGRHRCSERCCPLSNPKNSITGGWNPHFCSMACEKKL
RCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPLPSCQLPCSVSQPCG
HPPTHSCHFGDCLPCAVPVAKECVGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHSCART
CHPSPCDVSAGPSNGSRASCGQTCGAPRRDCRHTCTALCHPSSSCPDVRCEFPVTITCSC
GRITANVPCDAGGQIVDSVLEASIIHKLPSSLQPIEINGKKVPLGQRKLTCDDECAKMEK
KKVLSDAFGITPPNLESLHFGENAAVSEVLGDLLRRDAKWVLSIEERCKFLVLGRSRGGL
NALKVHVFCPMLKEKRDAIRLIAARWKLSVNAAGWEPKRFIAVHVTPKSKAPSRILGPKG
CTVNNIAQPAVFDSLVDMDPRLVVALFDLPRDADISALVLRFGGECELVWLNDKNALAVF
SDPARAATAMRRLDQGSAYCGAAVVHQSGVASAVASTTNVWGVSGGAKDAGGVAAALKGN
PWKKAVVQEPHLRESLWDAEEWSKNPTDLAAPSAWRANEAPPTASSNRWSVLEPEIASSL
PRASITIKEPVTETQVGGSVLPPKPQDMGIDDMADVVDDWDKAYD
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcctgcacaaaacaatagaaggaataacaacagtaatcggcctagaaacaat
aataataacaataatcctgttgttcaaagtggtggtgctcgtcgtgagtgggtagccagg
ggatctgctccaaccaacactgttccattttcagctgcccctgttaccccggtaacaaca
accactgttgtgacccctgggtttggtgggaatggaagagacaatgagaatgtgtcatct
gcaccggttaatcgatttcaaaaccaaaatcagacctatggggaacctaaattcaacagg
gggatgtataggggaaggggcagggggagctataatcatcaggagaacaggatggagagg
ccggtcagggaggtcagtgggaggattaatcaagagcgggtgaaagatcctaatttgcct
caacttgtgcaagaaatagaggagaagcttttgaagggaaacatcgagtgcatgatatgc
tacgatatggtgaggaggtctgcgcccatgtggtcatgttcgagctgctactcgattttt
catctgcattgtaccaagaaatgggcaagagctccaacttctgttgacacatctgcggag
aagaatcaaaggtttaattggcgttgcccaggttgtcaatcagtccagctcacttcatcc
agggacatacggtatctttgcttttgtgggaagaggcaagaccccccttcagatttatac
ttgactccacattcatgtggagagccttgtggcaagaaacttgagaaggagcttccaggg
aacggtctgagtgaagaggatctttgtcctcatgtttgtgtcttacaatgccatcctggt
ccttgtccaccttgtaaggcatttgctccagctagaagttgcccctgcgggaaggaagta
attaccactcgttgctctgatcgcaagtccgttcttacatgtggacagcagtgtggtaag
cttcttgactgtgggcgtcatcggtgtgaacagacttgccatgttggttcttgtggccat
tgtcaaattgttgtggatgcctattgcttttgtaagaagaaaacagagtctcttctttgt
ggagatatgggtgtgaaaggagatatcaagatggaggatggcgtcttttcatgcaattca
gtttgtggaaagaagcttagttgcggaaaccacatctgccgtgagctctgccatccaggg
ccatgtggggactgtgctttgttgcctagcaaggtcaaggcatgctgttgcggtaaaacc
agcttggaagaagaaaggcacagttgtttggatccaattccaacctgttccaaggtctgc
ggaaagcgtctccgttgtggggtacatcgctgtgaagctgtgtgccattctggtgactgt
gcaccatgtcttgttcctgtgactcaacgctgccgctgtgggtcaacctctcgaacagtg
gagtgctacagaacgcaggcagaagatgagcagttcacttgtgatagaccttgtgggcaa
aagaagaactgtggaaggcaccgttgtagtgagcgatgttgccctctttctaatccaaaa
aattccataactggtggttggaatcctcatttttgttcaatggcatgtgagaagaagctt
agatgtgggcagcattcttgcgagtcgctttgtcacagtggtcactgccctccctgcctt
gagacaattttcaccgatttgacttgtgcttgtgggagaacatcaatccctcctccgcta
ccttgtggcacacctcttccttcgtgtcagctaccatgctcggtttctcagccttgtggt
cacccacctactcacagctgccattttggagactgcttgccatgtgctgttcctgtagca
aaagagtgcgttggtggacatgtaattttaaggaacataccttgcgggtcaaaggacatc
cgatgtaacaagctttgtgggaagaccaggcagtgtggcttgcactcatgtgctagaact
tgtcatccttcgccatgtgatgtttctgctggacccagcaatggctccagagcctcttgt
gggcagacgtgtggtgctcctagaagagattgcaggcacacatgtactgctctctgtcat
ccctcttcttcatgtcctgatgttagatgtgagtttcctgttactattacttgttcttgt
ggccggattacagcaaatgttccttgtgatgctggaggtcagatcgttgactctgttctc
gaagcctctataatccacaagctgccttcatctcttcaacctattgaaataaatgggaag
aaggttcctctcggtcagaggaagcttacttgtgatgacgagtgtgcaaagatggagaag
aaaaaggttctttctgatgcttttggtataacccctcctaatcttgagtccctccatttt
ggtgagaatgcagctgtctctgaagtgctgggggatcttcttaggcgggacgctaagtgg
gtgttgtctatagaggaaagatgcaagtttttggttctcggcagaagcagaggggggcta
aatgcgctcaaagttcatgttttctgcccaatgttgaaagaaaagcgggatgcaattaga
ctgatagctgcaaggtggaagctttcagtaaatgcagctggttgggagcccaaaagattc
atcgctgtacatgttacacccaagtccaaagctccaagtcgtatacttggtcctaaaggt
tgtactgtcaataacattgctcagcctgctgtttttgattctctggtggatatggatcca
aggcttgttgtagctttgtttgacttgccaagagatgcagacattagtgctttagttctc
aggtttggtggtgagtgcgagcttgtctggttgaacgacaagaatgccttggctgtgttc
agtgatcctgcccgagcagcaacagctatgagaaggctagaccaggggtcggcttattgt
ggtgctgctgtagttcatcagagtggtgttgcatcagcagtggcatccactactaatgtt
tggggagtctctggaggagccaaggacgcgggaggagttgcagcagctcttaagggtaat
ccttggaagaaggctgtagtccaggagcctcatttgagggagagcctatgggatgctgaa
gaatggtccaagaatcccactgatttagcagccccttctgcctggagggcgaatgaagct
ccacctactgcctcgtctaataggtggagtgtcttagagcctgaaattgcttccagcttg
cccagggcatctattacaatcaaggaacctgttactgagacacaagtggggggttcagtt
ttgcctcccaaacctcaagatatggggatcgacgatatggcagatgtagtggacgattgg
gacaaggcttacgactga
DBGET
integrated database retrieval system
