Solanum pennellii: 107014744
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Entry
107014744 CDS
T04130
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
spen
Solanum pennellii
Pathway
spen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107014744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107014744
03051 Proteasome [BR:
spen03051
]
107014744
Membrane trafficking [BR:
spen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107014744
Proteasome [BR:
spen03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107014744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
TBK1_ULD
UBA_7
Dsc3_N
Ubiquitin_2
Rad60-SLD_2
UBA_HOIP
Ubiquitin_5
XPC-binding
Motif
Other DBs
NCBI-GeneID:
107014744
NCBI-ProteinID:
XP_015070282
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Position
3:complement(4868168..4878393)
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AA seq
561 aa
AA seq
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MSMGGGDASVPAGDGGDSNKVSNTGAGAGAGGGVTINIRCSSGSKFSVQVSLDSTVGSFK
SILAQQANIPAEQQRLIYKGRILKDEQTLESYGLEADHTVHLVRGSAPAPSANPASATNV
GGPNTAQNAPRNAASDAGGPFPGSGLGASMFPGLGSGGGGGLFGAGLPDFEQVQQQLTQN
PDMMRDMMNMPLVQNLMNNPETIRNLIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAA
RNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNASTLSGDTRNDAGSNPF
AALLGAQGGLGRQQANNPPTTGSETTDNLPAPNTNPLPNPWASAGTGAAQANTTARSNTA
GDTRGAPLGLGGLGSPGLEQMLGGMPDTTSLNQMMQNPAISQMMQSLLSNPQYMNQVLGM
NPQLRSMLDSNPQLREMMQNPEFIRQLTSPETVQQLMTFQQGLASQLGRQQTNQQPGQNA
GGAALDNSGMEMLMNMFGGLGTGGLGVPNRSNVPPEELYATQLTQLQEMGFFDTQENIRA
LTASGGNVHAAVERLLGNLGQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgggaggcggagatgctagtgttccggcgggagacggcggcgattcaaacaag
gtgagtaacaccggcgccggtgccggtgccggcggaggtgttacaatcaacatccgatgt
tctagtggctcgaaattctctgtgcaggtcagcctcgattctaccgtcggatcgttcaag
tctattcttgcacaacaagccaacattcctgctgaacaacagagattgatctataaaggc
cggatcttaaaggacgagcaaacactagaaagctacggtctggaggcagatcacacggtt
catttagttcgaggttctgccccagctccctctgcaaaccctgcaagtgcaaccaatgtt
ggaggtccaaatactgctcagaatgcaccaagaaatgctgcttctgatgcaggcggacca
tttccaggatcaggccttggagcttcaatgtttcctggtcttggaagtggtggcggcggt
ggtttgtttggagctggtcttccagattttgagcaggtccagcagcagttgactcaaaac
cctgacatgatgagagatatgatgaatatgcctcttgttcagaatttaatgaataaccct
gaaaccatccgtaacttgatcatgaacaatccccaaatgcgagagatcatggatcgtaat
ccggagcttgctcacgtactcaatgatcctgctactcttcgacagacaatggaggctgca
cgaaaccctgaacttatgcgtgagatgatgcgcaatacagacagggccatgagcaatatt
gaatcttctccagagggatttaacatgctgaggcgtatgtatgaaaatgttcaggagcca
ttcctaaatgcatcaacattgtctggagatacgagaaatgatgcaggatctaacccgttt
gcagctcttttgggagcacaaggtggactaggcagacagcaggcaaataatcctccaact
actggttctgagactactgataatctgcctgccccaaatactaatccacttccgaatcct
tgggcatctgcaggcactggagctgcccaagccaataccactgctaggtcaaatactgct
ggggataccaggggtgcaccacttggcctaggtgggcttggttccccaggtttggagcaa
atgctaggcggcatgcctgatactacttcgctaaatcaaatgatgcagaaccctgccatc
tcacagatgatgcagtctctcctttcaaatccacagtacatgaaccaggttttagggatg
aacccacagcttagaagcatgcttgattccaatccacagctcagagaaatgatgcaaaat
cctgaatttattcgtcaattgacatcgcctgagacagtgcagcaacttatgactttccag
caaggacttgcatctcaacttgggcgtcagcaaacaaaccaacagccgggccaaaatgct
ggtggagcagcacttgacaactcgggaatggaaatgcttatgaacatgtttggtggactt
gggaccgggggcttgggtgtccctaacagatctaatgtgcccccagaggaattatatgct
actcagctaacgcagttacaagaaatgggtttctttgacactcaagaaaatatccgggca
ctaactgcctccggtggcaatgttcatgctgccgtagagcgacttcttggaaatcttgga
caatag
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