KEGG   Solanum pennellii: 107014778
Entry
107014778         CDS       T04130                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
spen  Solanum pennellii
Pathway
spen03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107014778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107014778
   03036 Chromosome and associated proteins [BR:spen03036]
    107014778
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107014778
   Coactivators
    SAGA/TFTC/STAGA complex
     107014778
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107014778
    STAGA complex
     107014778
    TFTC complex
     107014778
    SAGA complex
     107014778
    SLIK complex
     107014778
SSDB
Motif
Pfam: TFIID_20kDa Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 107014778
NCBI-ProteinID: XP_015070332
LinkDB
Position
3:74612827..74622002
AA seq 643 aa
MAEIPSSSPKLTQPSNPIMDTTNQVTAGGAAPSTTSSNPGITMTSPSNNNSIAQSPSIDL
PQIPLAQSQQQQQQHQIQMQQPQQMQQQQQQQLTQSQQQQQQQMQLQQQQSNSSNLNGSN
SNLMSASNFQMQQNLQRSPSMAARMSQLQMQQQQQQFGLMRQQSGGLYGQMNFGVGGTSL
QQQQQQQLQQQQLQQQFQQQQQQQQQQNQQQQQIGGQMGSGNLARAALMGQTGHLPMLSG
QAAAAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSLQAMGMMGSLNMSSQLR
ANGALAYAQRVNQGQLRQQQLSQQNPLTTTQKISAQSLPRTSFANSQLPGLTQNGQSAIM
QNNSSQQQWLKPMPAISTPNSPSFRLQQQRQQMLLQHQNSMGLNPQQLSQIVQQQQQIGH
PQMHQQQQQQQQQQQQQQLSHQQQSSPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSS
QGTEASNQLLGKRKIQDLVSQVDAQGKLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKS
STLESKDVLLHLEKNWHLTIPGFSSEERKQYPENSSSDLHKKRLDVIRTLMETSQTETST
NSSAKETVRPVAGDSNHMIRPPSSDNMVSQSNASQMLHEMTRF
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggctgaaattccatcatcttccccaaaattaactcaaccatcgaaccctataatggat
accacaaaccaagtaaccgccggcggagctgcaccgtcgacgacgtcgtctaatcctgga
attacgatgacttctccttctaacaacaattcaatcgcacaatcgccttcaattgacctc
cctcaaatcccgttagcccaatctcagcaacagcagcagcagcatcaaattcagatgcaa
cagcctcaacaaatgcagcagcagcagcaacagcaattgacacaatctcaacaacagcag
cagcagcaaatgcagctccagcagcaacagagtaattcgagcaatcttaacggcagtaac
agcaacttgatgtccgcctctaattttcagatgcagcaaaacttgcagagatcaccctca
atggcggcgaggatgagtcaattgcaaatgcaacagcagcaacaacaatttggtttgatg
aggcagcaatcaggagggctttatggtcaaatgaattttggggttggaggtacttcgctc
cagcaacagcagcaacaacaattgcagcaacagcaattgcagcaacaatttcaacaacag
caacagcagcagcaacaacagaaccaacaacagcagcaaataggtggtcagatgggtagc
ggaaatttagctagggcagctttaatgggacagactggccatctgcccatgttatctgga
caagctgctgctgcagcagcggctgttgcccagttcaatttgcaatctcaatttttgaat
tcgccacggcagaaggcaggtctaatgcaggggaatcaattccatacagggaattcccat
ggccagtccttacaggcaatgggaatgatgggatctctcaacatgagctctcagcttagg
gcaaacggggccctggcatatgcacaaagggtaaatcaaggtcagctgaggcagcagcag
ttgtcccagcaaaatcctctcaccactactcagaaaatatcggctcagagtcttccaagg
acgtcatttgctaactctcagttacctgggttgactcagaatggacaatctgcaattatg
cagaataattcttcacagcagcagtggttgaagccaatgcctgcgatttctactcctaat
tccccttcctttcgtcttcaacagcagaggcagcaaatgcttctacagcaccaaaactca
atgggtttgaacccacagcagctatcccaaattgtacaacagcagcaacagattgggcac
ccccagatgcatcaacagcaacagcaacagcaacaacagcagcaacagcaacagctttca
catcagcagcagtcttccccaaggatggctgctccagctggccaaaaatccctgagttta
actggctcacaaccagatgccactggatccggaacaactactccaggggggagttcaagt
caggggactgaagcaagcaatcagcttcttggaaagagaaagatacaggatttggtttca
caggtggatgcgcagggaaagcttgatcccgaagttgaagatcttcttctagagattgct
gatgacttcattgattcggttactacatttgcttgcaatttggcgaagcatcggaaatct
tcaactttggagtccaaggatgtactgttacatctagagaaaaactggcacttgactatt
ccaggcttttcaagtgaagagaggaaacagtatccagaaaattcatcaagtgatctccac
aaaaagcgtttggatgtgatacgtaccttgatggagacctcacaaacagaaacaagtaca
aatagtagtgctaaggaaactgtcagaccagtggcgggtgactcaaatcacatgatcaga
cctccaagttcagacaacatggtttcacagtctaatgcttctcaaatgttgcatgagatg
acaaggttttga

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