Solanum pennellii: 107014778
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Entry
107014778 CDS
T04130
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
spen
Solanum pennellii
Pathway
spen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107014778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107014778
03036 Chromosome and associated proteins [BR:
spen03036
]
107014778
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107014778
Coactivators
SAGA/TFTC/STAGA complex
107014778
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107014778
STAGA complex
107014778
TFTC complex
107014778
SAGA complex
107014778
SLIK complex
107014778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
107014778
NCBI-ProteinID:
XP_015070332
UniProt:
A0ABM1GFD8
LinkDB
All DBs
Position
3:74612827..74622002
Genome browser
AA seq
643 aa
AA seq
DB search
MAEIPSSSPKLTQPSNPIMDTTNQVTAGGAAPSTTSSNPGITMTSPSNNNSIAQSPSIDL
PQIPLAQSQQQQQQHQIQMQQPQQMQQQQQQQLTQSQQQQQQQMQLQQQQSNSSNLNGSN
SNLMSASNFQMQQNLQRSPSMAARMSQLQMQQQQQQFGLMRQQSGGLYGQMNFGVGGTSL
QQQQQQQLQQQQLQQQFQQQQQQQQQQNQQQQQIGGQMGSGNLARAALMGQTGHLPMLSG
QAAAAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSLQAMGMMGSLNMSSQLR
ANGALAYAQRVNQGQLRQQQLSQQNPLTTTQKISAQSLPRTSFANSQLPGLTQNGQSAIM
QNNSSQQQWLKPMPAISTPNSPSFRLQQQRQQMLLQHQNSMGLNPQQLSQIVQQQQQIGH
PQMHQQQQQQQQQQQQQQLSHQQQSSPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSS
QGTEASNQLLGKRKIQDLVSQVDAQGKLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKS
STLESKDVLLHLEKNWHLTIPGFSSEERKQYPENSSSDLHKKRLDVIRTLMETSQTETST
NSSAKETVRPVAGDSNHMIRPPSSDNMVSQSNASQMLHEMTRF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaattccatcatcttccccaaaattaactcaaccatcgaaccctataatggat
accacaaaccaagtaaccgccggcggagctgcaccgtcgacgacgtcgtctaatcctgga
attacgatgacttctccttctaacaacaattcaatcgcacaatcgccttcaattgacctc
cctcaaatcccgttagcccaatctcagcaacagcagcagcagcatcaaattcagatgcaa
cagcctcaacaaatgcagcagcagcagcaacagcaattgacacaatctcaacaacagcag
cagcagcaaatgcagctccagcagcaacagagtaattcgagcaatcttaacggcagtaac
agcaacttgatgtccgcctctaattttcagatgcagcaaaacttgcagagatcaccctca
atggcggcgaggatgagtcaattgcaaatgcaacagcagcaacaacaatttggtttgatg
aggcagcaatcaggagggctttatggtcaaatgaattttggggttggaggtacttcgctc
cagcaacagcagcaacaacaattgcagcaacagcaattgcagcaacaatttcaacaacag
caacagcagcagcaacaacagaaccaacaacagcagcaaataggtggtcagatgggtagc
ggaaatttagctagggcagctttaatgggacagactggccatctgcccatgttatctgga
caagctgctgctgcagcagcggctgttgcccagttcaatttgcaatctcaatttttgaat
tcgccacggcagaaggcaggtctaatgcaggggaatcaattccatacagggaattcccat
ggccagtccttacaggcaatgggaatgatgggatctctcaacatgagctctcagcttagg
gcaaacggggccctggcatatgcacaaagggtaaatcaaggtcagctgaggcagcagcag
ttgtcccagcaaaatcctctcaccactactcagaaaatatcggctcagagtcttccaagg
acgtcatttgctaactctcagttacctgggttgactcagaatggacaatctgcaattatg
cagaataattcttcacagcagcagtggttgaagccaatgcctgcgatttctactcctaat
tccccttcctttcgtcttcaacagcagaggcagcaaatgcttctacagcaccaaaactca
atgggtttgaacccacagcagctatcccaaattgtacaacagcagcaacagattgggcac
ccccagatgcatcaacagcaacagcaacagcaacaacagcagcaacagcaacagctttca
catcagcagcagtcttccccaaggatggctgctccagctggccaaaaatccctgagttta
actggctcacaaccagatgccactggatccggaacaactactccaggggggagttcaagt
caggggactgaagcaagcaatcagcttcttggaaagagaaagatacaggatttggtttca
caggtggatgcgcagggaaagcttgatcccgaagttgaagatcttcttctagagattgct
gatgacttcattgattcggttactacatttgcttgcaatttggcgaagcatcggaaatct
tcaactttggagtccaaggatgtactgttacatctagagaaaaactggcacttgactatt
ccaggcttttcaagtgaagagaggaaacagtatccagaaaattcatcaagtgatctccac
aaaaagcgtttggatgtgatacgtaccttgatggagacctcacaaacagaaacaagtaca
aatagtagtgctaaggaaactgtcagaccagtggcgggtgactcaaatcacatgatcaga
cctccaagttcagacaacatggtttcacagtctaatgcttctcaaatgttgcatgagatg
acaaggttttga
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integrated database retrieval system
