Solanum pennellii: 107014781
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Entry
107014781 CDS
T04130
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107014781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107014781
03036 Chromosome and associated proteins [BR:
spen03036
]
107014781
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
107014781
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
107014781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR75_1st
Beta-prop_SCAP
Ge1_WD40
RMC1_N
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WDR54
CFAP43_N
Beta-prop_VPS8
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
107014781
NCBI-ProteinID:
XP_015070335
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Position
3:complement(63193185..63196077)
Genome browser
AA seq
453 aa
AA seq
DB search
MDAGSHSASSNKKQSRCPLQEQLLQRKNSRDNLDRFIPNRSAMDFDYAHYMLTEGRKGKE
NPAVSSPSREAYRKQLAETFNMNRSRILAFKNKPPTPVEAIPNEIASVQHNKTAKPRRYI
PQTSERTLDAPDIMDDYYLNLLDWGSSNVLSIALGGTVYLWDASDGATSELVTVDEENGP
VTSVKWAPDGRHIAVGLNNSEVQLWDSTANRLLRTLKGGHRSRVGALDWNNHILTTGGMD
GQIINNDVRIRNPIVDTYQGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSTASSNSTT
QWLHRLEDHTAAVKALAWCPFQGNLLASGGGGSDRCIKFWNTHTGACLNSIDTGSQVCSL
LWNKNERELLSSHGFTQNQLTLWKYPSMVKVAELTGHTSRVLFMAQSPDGCTVASAAGDE
TLRFWNVFGTPEAAKPAPKANPEPFAHLNRGIR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcacactctgcctcatcaaataagaaacagtctcgttgccctcttcag
gaacaacttcttcaacgaaaaaattctcgtgataatttggataggtttattccaaatcga
tcagcgatggatttcgactatgcacattacatgctgacagagggacggaaaggtaaggaa
aacccagctgttagctctccctccagagaggcatacaggaagcagcttgcagaaactttc
aacatgaacaggtctcgcattctggcattcaagaacaaaccaccaactcctgttgaggcc
attcctaatgagattgcctctgttcaacataacaaaacggcaaagccccgtcgatacatt
cctcagacctctgagaggacattagatgcaccagatatcatggatgattactatttgaat
ttgttagactggggcagcagcaatgttctttctattgctcttggcggcactgtgtatctg
tgggatgcatctgatggtgctacttcagagctagtcactgttgatgaagaaaatggccca
gttacaagtgttaaatgggctcctgatggtcgacatattgctgttggtcttaacaattct
gaagttcagctttgggattctacagcaaatagactgttgagaactttgaaaggcggtcac
cgatcccgagttggtgctctagattggaacaatcacattttgacaactgggggaatggat
ggtcaaatcataaacaatgatgtgagaataagaaatcccattgttgacacttaccaagga
catcatcaagaagtctgtggtctaaaatggtcagcctctggccagcaattagctagtggt
ggaaatgacaacctcctccacatatgggacagatcaacggcttcttccaactctacaaca
cagtggcttcaccggctggaagatcacacagctgctgttaaagcccttgcttggtgtcct
ttccagggtaacttattggcctctggtggtggtggaagtgacaggtgcataaaattctgg
aatacccacactggtgcttgcttgaactcaatcgatacaggatctcaggtttgttccctg
ctgtggaacaagaacgaacgtgagctgctaagttctcatggtttcactcagaatcagctc
accctttggaaatacccttctatggttaaggtagctgagctaactggccacacatctaga
gtacttttcatggctcagagtccagatggttgcacagttgcatcggcagctggagatgaa
actctcagattctggaatgtatttgggactccagaagcagcaaaacctgcaccaaaggca
aatcctgaaccattcgctcacctgaaccgtggtatccgctga
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