Solanum pennellii: 107014842
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Entry
107014842 CDS
T04130
Name
(RefSeq) oligouridylate-binding protein 1B isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107014842
03041 Spliceosome [BR:
spen03041
]
107014842
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107014842
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107014842
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
107014842
NCBI-ProteinID:
XP_015070436
UniProt:
A0ABM1GFL8
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Position
3:complement(74694458..74699041)
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AA seq
417 aa
AA seq
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MLNQRLKQEQQQALMQQALLQQQSLYHPGLIAAPQIPSGNLPPGFDPSTCRSVYIGNIHP
QVSETLLHELFSCTGLVEGCKLVRKDKSSYGFVHYYDRRSAELAIVTQNGRHLFGQPIKV
NWAYASGQREDTSSHFNVFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQQTGRSRGFG
FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGANSNDEQGSEIRSVVELTNGSSEDG
KDPASSDAPENNPQYTTVYVGNLAPEATQLDLHRHFYVIGAGVIEEVRVQRDKGFGFVRY
STHDEAALAIQMGNAQSILCGRQIKCSWGNKPTPPGTASNPLPPPAAAPLGLTATDLLTY
ERQLAMSKMAGVHALMQSQGQHPLKQASMGMSASGASQAIYDGGFQNLAAQQLMYYQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcagaggctaaaacaagaacaacaacaagccttgatgcagcaagctcttctt
caacaacagtcactctatcaccctggcctaatagctgctcctcagataccaagtggaaat
ctacctcctgggtttgatccaagtacatgccgcagcgtgtatattgggaatattcaccca
caggtgtctgaaactcttcttcatgaacttttttcatgtactggtctggttgaagggtgc
aaacttgtaaggaaggacaagtcatcttatggctttgttcattattatgaccgtaggtct
gctgaacttgctatagttactcaaaatggaaggcacctgtttgggcagcctattaaagtt
aactgggcatatgccagtggacagagggaggatacttcaagtcacttcaatgtatttgtt
ggtgatctgagcccagaagttactgatgccatgttgtttgcttgcttctctgtttaccct
agttgctctgatgctagggtaatgtgggatcagcagactgggcgttctaggggttttgga
tttgtttctttccggaaccaacaggatgcccaaagtgcaattaatgatttaactgggaaa
tggcttggtagtagacagatacgttgtaactgggctacaaaaggagctaattctaatgat
gagcaaggctcagaaatcagaagtgtcgtggaattaactaatggatcatcagaagatggt
aaagatccagcaagtagtgatgctcctgaaaacaacccgcaatatacaactgtttatgtg
ggtaatcttgctcctgaggcgacacaactcgatctccatcgccacttttatgtcattggt
gcaggagtgatagaggaagttcgggttcaacgtgataaaggatttggttttgtaagatac
agcacccatgatgaggcagctttggcaattcaaatgggaaatgcccaatcaattctgtgt
gggagacagattaagtgttcttggggtaacaaaccaacaccacctggaacagcctcaaat
cctcttccaccaccagctgcagcgccattaggccttactgccactgatctcttgacttat
gaacggcagctagctatgagtaagatggctggtgttcatgccctcatgcaatctcagggt
caacatcccctgaagcaagcatcaatgggaatgagtgcttctggagcaagccaggctata
tatgatggtggtttccagaatcttgctgctcagcagctcatgtattaccagtaa
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