Solanum pennellii: 107014890
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Entry
107014890 CDS
T04130
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107014890
Enzymes [BR:
spen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
107014890
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107014890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
107014890
NCBI-ProteinID:
XP_015070489
LinkDB
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Position
3:63928377..63936809
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AA seq
383 aa
AA seq
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MNTKRKREDMEIVWQTPANPPERHDYIFRNGVRYVKPYYFEFISHVKNRWAGKTIVDLFS
DEFKGRPRDYYESAVKSGRIQVDGRKVSVSYVVQSSQKISHFLHRHEPPVMSWDVEILCE
EPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSAS
RADLFRQQIESGVVQKRYIARVIGVFPDKQQVVNANVNYNAREGRSTVEVGDNQGNSTAS
LKGKAACTKFTRISTNGKQSIVLCEPVTGRTHQIRVHLQYTGHPIANDVLYMSEFVSSRA
AEGLSADRAAAKSCSPPDPISRTSDMENDSNEDFSIDPMCTNCPNLAPKGYEGNEEGLWL
HCVKYSGPDWIYECPHPDWASLS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaagaggaagcgagaggatatggagattgtgtggcaaactccggccaaccca
ccggaacgccatgactacatcttccgtaatggagtacgctatgttaagccttactacttc
gaattcatctcccatgtgaagaataggtgggctggaaagacaattgttgatctcttctct
gatgaatttaaaggaagacctcgtgattactatgaatctgccgttaagtctggacgtata
caagttgatggacgaaaggtgtctgtttcatatgtagttcagtcatcacaaaaaattagc
catttcctgcacaggcatgaaccaccagtgatgtcgtgggatgtcgaaatactatgtgaa
gaaccagatgtgctaacagtttgcaagcctgcttctgttcctgtgcatccatgtggacaa
taccgcaagaatacggtcgttggtatactacaagccgagtatggcctggcacctttattt
ccggttcatcgcctagatcgcttggtctcaggactacttattttggctaggagtgcttct
agggctgacctcttcaggcaacagatagaatcaggggtagtgcagaaacggtatattgca
agagtaattggagtattcccagataagcagcaagttgtgaatgctaatgtcaattacaat
gctcgagaagggaggagcacagttgaggtgggggataaccagggaaatagtactgcttca
ctgaaggggaaggctgcctgtacgaaatttacaaggattagtaccaatgggaagcaaagc
atcgttttgtgcgaacccgtgactggcaggacacatcagatacgtgtgcatctgcaatat
acaggtcatccaatagccaatgatgtgctctatatgtctgaatttgtgtctagtcgcgct
gctgaaggattgagcgcggatagagctgcagcaaaatcatgttctcctccagatcccatc
tctcgaactagtgacatggaaaatgactctaatgaagatttcagcattgatcctatgtgt
acaaattgtccaaatcttgctccgaaagggtatgagggtaatgaagagggtctatggctg
cattgtgtaaaatattcgggacctgactggatatatgaatgtccacatccagattgggca
tctctaagttga
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