Solanum pennellii: 107014943
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Entry
107014943 CDS
T04130
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107014943
Enzymes [BR:
spen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
107014943
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
107014943
Prokaryotic type
107014943
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
CCDC106
Motif
Other DBs
NCBI-GeneID:
107014943
NCBI-ProteinID:
XP_015070557
UniProt:
A0ABM1GFY1
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All DBs
Position
3:complement(73453611..73459733)
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AA seq
980 aa
AA seq
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MPQISSLRLLFSSANHHALLTSPLTPKPSLYLSHLFKIKHPPFLHTHTHKPCRLLFAAYS
RKPKNIERPGSSSGSRRRSSSSSSNKENKGKSVMEESSSSAIAESVGFNKRRAEGKDKND
GPRKNLQLKVRKLNPVNTISYVQILGTGMDTQDTTPSVLLFFDKQRFIFNAGEGLQRFCT
EHKIKLSKIDHIFLSRVCSETAGGLPGLLLTLAGMGEEGMSVNVWGPSDLKYLVNAMKSF
IPNAAMVHARSFGPPVDSSGATDELFVPINDEVVKISAVLLRPRYSKVSKTTKEGSSELD
DSLVGENLSAERMQSTAEFALKPGDLAVVYVCELPEIKGKFDPKKAAALGLRPGPKCREL
QLGNSVQSDHQDIMVHPSDVLGPSVPGPIVLVVDCPTPSHLQELSSVHSLTPYYSDPSEQ
SKEMCKKVDCVIHLSPASVTCTTEYQQWMSRFGEVQHVMAGHQLKNVEIPILKSSARIAT
RLNYLCPQFFPSPGFWSLPQLKSLPSVSKGPSEFSLPASCQVITAENLLKFHLRPYAQLG
LDRSGIPEITSRPKIIEDLITEIPEIVDASEHITQLLHHGNKIANGGSTTLQANNVVIEE
PWLHETALPSCLEGITREDMEIVLLGTGSSQPSKYRNVTSIFINLFSKGSILLDCGEGTL
GQLKRRFGIEGADEAVKGLRCIWISHIHADHHTGIARILALRRDLLNETPHEPLVVVGPR
QLKIFLDAYQKLEDLDMQFLDCRQTTEASLRTSESGENKDANGSVGVQNDQKNGSNLFAK
GSRMESYWKRPGSPAAAFPVLAMLKRILREAGLEALISFPVIHCPQAYGVVLKAADRTNS
TGKKIPGWKIVYSGDTRPCPELVAASHGATVLIHEATFEDGMVEEAIARNHSTTQEAIEV
GDAAGAYRIILTHFSQRYPKIPVFDETHMHKTSIAFDMMSVNLADLAMLPRVLPYLKLLF
RDEMIVDESDDVNVATAAAI
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaatctcaagcctacgcctcctattctcctccgccaatcaccacgcacttctc
acttcccctttaaccccaaaaccatcgctttacctttctcatctcttcaaaatcaagcac
cccccatttctccatacccacactcacaagccctgtcgtcttctcttcgccgcatattca
agaaaacccaaaaatatcgaacgacccggttcgtcgagcggttcaagaaggcgtagtagt
agcagtagttcaaataaggagaataaagggaagtcggtaatggaagaaagtagtagtagt
gcgattgctgagtctgttgggtttaataaaagaagggctgaaggtaaagataagaatgat
ggtcccaggaaaaaccttcaactcaaagttcgcaaactcaaccctgttaatactatttca
tacgtccagatccttgggactggcatggatacacaagatacaacaccctcagtccttctc
ttctttgataaacagaggtttatttttaatgctggagaaggattgcaacgcttctgcaca
gagcataaaattaagctatcaaagattgatcacatatttctgtcgcgagtctgttcagaa
actgccggtggactcccaggtcttttattgactttggctggcatgggagaagaaggaatg
tctgtcaatgtatggggtccttctgatctcaagtacttggtcaatgcaatgaaatcattc
atcccaaatgccgccatggtccatgcacgtagttttggcccacctgttgattcttcgggg
gctactgatgaactctttgttcctattaacgatgaggttgtcaaaatatctgctgttctg
ttgcgaccacgttactcaaaagtgtctaagacgacaaaggaaggatcctctgaacttgat
gattcactagttggtgaaaatctttcagcagagaggatgcagtccacagctgaatttgca
ttgaagcctggggatcttgctgtagtgtatgtttgtgagttgcctgaaattaagggaaag
tttgatcccaaaaaggctgctgctcttgggttgagacctggcccaaaatgccgtgaattg
caactcgggaattctgtacagtcagatcatcaagacatcatggttcaccctagtgatgta
ttggggccttctgttcctggtcctattgtactcgttgttgactgcccaacaccgtctcat
ctgcaagaattgtcgtctgtacattctctcactccgtattactcagatccatccgaacaa
tccaaggaaatgtgcaaaaaagttgattgtgtgatacaccttagtcctgcttcagtaacg
tgtacaactgaatatcagcaatggatgtcaagatttggtgaggtgcagcacgtcatggca
ggacatcagttgaagaatgttgaaattccaattctgaagtctagtgcaagaattgccaca
aggctgaactacttgtgccctcaattctttccttcgcctggtttttggtctcttccgcag
ttaaagagcttaccctcagtctctaagggtccaagtgagttctctcttccagcttcatgt
caagttattacggcagagaacctcctcaagttccatcttcgcccatatgcacagcttggt
ttagacagatctggtattcctgaaattacttctcggccaaaaatcatagaagacttaatt
acagaaattcctgaaattgtggatgcttctgagcatattacccaactgttgcatcatggt
aacaaaattgcaaatggaggcagcacgacattgcaggccaacaatgttgtgatagaagag
ccctggttgcatgaaactgcattacctagttgtttggaaggtataacaagagaggatatg
gagattgttcttcttggaactggttcttcccagccttcaaaatatcgaaatgtcacttcc
atttttatcaatcttttctcaaagggaagtattctgttagattgtggtgaaggaacattg
ggacagctaaaaagaagatttggcattgaaggtgctgatgaagctgtaaaaggtctaagg
tgcatttggatttctcatattcatgctgatcatcatactggtattgcaagaatacttgct
ctccgacgcgatttacttaatgaaactcctcatgaacctttagttgttgtgggaccacga
cagcttaagatattccttgatgcataccaaaagcttgaggacctagatatgcagttcctc
gattgtaggcaaactacagaagcttcattgaggacttctgagtcaggtgaaaacaaggat
gctaatgggagtgtaggtgtacaaaatgaccaaaagaatggttctaacttatttgctaaa
ggtagccgtatggagagttattggaagaggccaggcagcccagctgcagcattcccggtg
ctggcaatgttgaagagaattctgagagaagcaggattggaagcattgatcagctttcct
gttattcattgtccacaagcatatggtgttgtcctgaaggcggcggataggactaacagc
actgggaagaagataccggggtggaaaattgtttactctggcgacacgaggccttgtcca
gaactagttgcagcttcccatggggccacagttcttattcatgaggctacctttgaagat
ggcatggtggaagaagccatagcgagaaatcacagcacaacacaggaagctattgaagta
ggggacgctgctggagcatatcgaatcatcctcactcatttcagtcaaagataccctaaa
attccagtttttgacgaaacacacatgcacaaaacaagcattgcttttgatatgatgagt
gttaacttagcagacctagccatgcttccaagagttcttccatatcttaaactgctattt
cgtgatgaaatgattgttgatgaatctgatgatgtaaatgttgctacagcagcagctatt
tga
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