Solanum pennellii: 107014951
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Entry
107014951 CDS
T04130
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107014951
Transcription machinery [BR:
spen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107014951
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
107014951
NCBI-ProteinID:
XP_015070568
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Position
3:complement(2006365..2011510)
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AA seq
516 aa
AA seq
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MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETS
KENEKRSRRVTKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDH
LVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSER
RKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQV
KENLQNDLGREPTDGEVAEATNIDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQD
FANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG
LESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQ
EELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcaagctctgcatctcgaagtccattaggattgagctcaagg
ttttcggctcgtttatgtccgcttaaaaggccagtaattgtatcgtttaaaaaagataaa
acgaagaatacaactttagtttcacctaaggagtccatatccttgcctattgaaacatct
aaagaaaatgaaaaaaggtcaagacgagtaactaagcgtactgagagagtgcatgctgtt
acaatcgaagcccctccaagtacgttagaattagactacagtgaagctgctgccaaactt
gaaagtatctacaagcgcagtctggaaactgctagccccaatacagaagttaaggatcat
ttggtgaagagaaggccaaggacgaggaagaggattgtagaaagtgacgaggaagcgaag
aaagaagttgttgataatgtggtcaagaatcgtagaaagaagtcaaagaggttgaatctt
gaccagaggattgctctactaaagaataaagaaggtaaaatgcttgcttcatccgaaaga
agaaaacttaaagaggacaccgaagatgaaaaaattgataagcttgtcagagaatattca
ggtgctaccgacttagcgagcttagactggaagaaaatgaagatccctccagtgcttcca
tcatctgagcatacgtggctcttcaagttgatgcaacctatgaaggcaatccttcaagtt
aaagaaaacttgcaaaatgatttggggagagaaccaactgatggtgaagtggctgaggca
acaaatatagatgcctctgaactacggaaaaagctggaagctggtcgagctgctagaaat
aagctgattaagcacaatctacgtcttgttttgtttgtgatgaacaaatattttcaagat
tttgcaaatgcgtcaagattccaagacctctgtcaggcaggagttaagggtctaatcaca
gctattgaccgatttgaacctaataggaaatttaggctatcaacatatggtcttttttgg
ataaggcatgccataatacgttctatgacaacctcaagcttcaccaaagttccgttcggg
cttgaatctatcagagtggaaatccagaaggccaagttggagttgctgtttgagctccag
aggataccaacagatgatgaaataattaaaagagttggattttcccctgagagataccat
gaagtgatgaaagtatctaaacctatcttctctctccacgccagaaacaagacaacccaa
gaagaactcatcaatggaataactgacgtagatggcgttgatggggataagaggaagcag
ccagctctactcaggcttgctcttgatgatgtgcttgattctcttaagcccaaggagagt
ctagtaatcagacaaagatatggacttgatggcaaaggtgatagaacattgggagaaatt
gcgggtaacctaaatatttcgagagagatggtacggaagcatgaagtgaaggctctcatg
aagctcaagcatccaactcgagtggattatgttcgccggtacatattctaa
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