Solanum pennellii: 107014976
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Entry
107014976 CDS
T04130
Name
(RefSeq) BUD13 homolog isoform X1
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107014976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107014976
Spliceosome [BR:
spen03041
]
Complex B
Other components
RES complex
107014976
Complex C
107014976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
107014976
NCBI-ProteinID:
XP_015070602
UniProt:
A0ABM1GG23
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Position
3:complement(5658826..5664899)
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AA seq
571 aa
AA seq
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MMAPSSTSTSLKEYLKKYESNTNEEGKKKQKKKKKVKPNDVKGVVVVDEDPVWQKPVKIE
DEEDESADEELPQVNEDIEVKRMKRLEQIRARRPFGSVSEDGSGWVSVSSTSNDQISDLS
PTRRRPGRNDSPSPEPQLNPSSPSADLSPLRKPRARNDTPSPESVRKQPRTQEGDLSPPR
KRSARNDTQRTRILTPSPEPQLKPSSAKDADLSPPRKRRVRNDTPEPEMKPLSTRDADIS
PPRRQRARNDTPESDRKSLRSRDTDISPPRRRKTRNDTPSPEPKARPSADLSPPRRRQKY
GQSLSDISDVSPPRRGSHAQGDSRADQGADLSPLRKKKAQNALEARPDSSTTKQGPKTGL
VSGKDIKEEIDRTKKEDWMRFQEMDPLVSGRGAEPVYRDKVTGQRMSKEEFLKSKKKKEE
KEKPKEIKLEWGKGLAQKREMEVRLQELESEKDKPFARSRDDPELDTMLKERVRWGDPMA
HLVKKKLDPILPDFGANEKMKDSGFIIPQDIPSHSWIKRGLDAAPNRYGIRPGRHWDGVD
RSTGYEKELFKRTNEKQATEREAYLWSVSDM
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccatcttcaacctctacctccctgaaggagtacctaaaaaaatatgaaagt
aacaccaatgaagaaggaaagaagaaacagaagaaaaagaagaaggttaaacctaatgat
gtcaaaggtgtcgtcgttgttgacgaagatcctgtttggcaaaagcctgtaaaaattgaa
gatgaagaggatgagtcagctgatgaagagctgcctcaggtaaatgaagatattgaagtt
aagcgtatgaagagattggaacagattagagctagacgtccatttggttctgtttcagaa
gatggaagtggttgggtgtctgtttcaagtacttctaatgaccaaatatctgatttgtcc
ccgacacggagaaggcctggtcgaaatgatagtccctcaccagaaccacaacttaatcca
tcaagtccttcagctgatttatcaccactacgtaaaccgagggctcgaaatgatacaccc
tctccagaaagtgtgcgcaagcaaccaagaactcaggagggtgatctgtcgccaccccgc
aaacgtagtgccaggaatgatacacagaggactaggattcttacaccttcacctgaacca
cagttgaagccttcaagtgcaaaagatgctgatttgtcaccaccacgtaagcggagggtt
cggaatgatacacctgaacctgaaatgaagcctttgagcactagagatgctgatatttca
ccaccacgtagacaaagggctcggaatgatacacctgaatctgataggaagtccttgaga
agtagagatacggatatctcaccaccaaggagacgtaaaactcgaaatgataccccttca
ccagaacccaaagccaggccttctgctgatttatcaccaccaagacggaggcaaaagtac
ggccaaagtctttctgatatctctgatgtttctcctcctcgacgaggttcccatgctcaa
ggtgattcgagagccgatcaaggtgcagatctctcgcccttgaggaaaaagaaggcccaa
aatgcactggaggcacgtccagattcatccactacgaagcagggaccaaagacgggtttg
gttagtggcaaagatatcaaagaagaaattgataggacaaagaaggaagactggatgagg
tttcaggaaatggatcctttggttagtggccgtggtgctgaaccggtatatcgggataaa
gttacaggacaacggatgtcaaaggaggagttcttgaagtccaagaagaagaaggaagag
aaggagaagccaaaggaaataaaactggaatggggaaagggcttggctcaaaagcgtgaa
atggaggttaggcttcaggaactggaaagtgagaaggacaagccatttgcacggagcaga
gatgatccagaactcgacacaatgctgaaggaaagagttcgatggggtgacccaatggca
catttggttaagaaaaagctggatccaattctgccagactttggggctaatgagaaaatg
aaggactctggttttataatccctcaggatatcccttctcacagctggataaaaagaggc
ttggatgcagcacctaatcgttatgggataaggccagggcgacactgggatggggttgat
cggagcacaggatacgagaaggagttgttcaagaggacgaatgagaaacaagcaacagaa
cgagaagcttatctgtggtctgtgtccgacatgtaa
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