Solanum pennellii: 107015109
Help
Entry
107015109 CDS
T04130
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
spen
Solanum pennellii
Pathway
spen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107015109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107015109
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
107015109
Prokaryotic type
Archaeal type
TFE
107015109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
YBR138C_C
DUF7836
Zn_ribbon_SprT
DUF7212
Zn_Ribbon_TF
HVO_A0261_N
FYVE_2
Zn_ribbon_8
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
107015109
NCBI-ProteinID:
XP_015070767
UniProt:
A0ABM1GGI0
LinkDB
All DBs
Position
3:72942850..72950930
Genome browser
AA seq
472 aa
AA seq
DB search
MSIESFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAVVILDALTRRQWVREEDLAK
DLKLHTKQLRRTLRFFEEEKLITRDHRKEGAKGAKVYNSAVAATVDGLQNGKEGDDKIKM
HTHSYCCLDYAQIYDVVRYRLHRMKKKLRDELDNKNTVQEYICPNCAKRYTALDALRLVS
TEDEYFHCESCNGELVAESDKLASQGSTDGDDNDRRRRREKLEDMLHRVEAQLKPLMDQL
ARVKDLPAPEFGSLQAWEVRANAVARGANGDNANDSKSGQGLGFGGTPMPFVGETKVEVA
FSGLEEKGDIKSEVSVTPMKVLPPWMIKEGMNLTKEQRGEVKQESNMEGPSAAAGSSDDK
KSIGFEDVKNIQDEYIKAYYEALFKRQKEQEEATKMLPETSTTDGVYNTFTERQVGMKSK
REEEDEGEDVEWEEAPPAGNTTTGNLKVDLNVQADASEDDNDEEDDIDWEEG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgaatcattcaataggttggtgaaacttgcggcaagagctttctatgatgac
attacaactaaaggcgacaaccagcccaagtccggtagaagtgataatagaggaattgca
gtggtgattcttgacgcactcacaaggaggcaatgggtgagggaggaagacttggcaaag
gacttgaagttgcacacgaaacaattacgccgcaccttgcggttctttgaagaagaaaag
ctcatcacacgagaccataggaaggagggagcaaagggtgctaaagtatacaattctgca
gttgcagctactgttgatggcctgcagaatgggaaagaaggagatgacaaaataaagatg
catactcattcttattgctgcctggactatgcacagatatatgatgtcgtgaggtacaga
ctgcaccgaatgaagaaaaagttaagagatgagctggataacaaaaacacagtgcaggag
tatatttgtcccaactgtgcgaaaagatatactgcgttggatgcgttgcggctggtctct
actgaggatgagtacttccactgtgagagttgcaacggggaactagtggcagagagcgac
aagctagcttctcaagggtccaccgatggggatgacaatgataggagacgccgccgcgaa
aagttggaagacatgcttcatagggtggaggcacaactcaaaccattgatggatcaactt
gccagagtaaaagatttacctgctcctgagtttggaagccttcaagcatgggaagtgcga
gccaacgctgtggcccgtggtgcaaatggagataatgcaaatgactcaaagtcaggacaa
gggcttggatttggtggaacacctatgccgtttgtaggggagacaaaggttgaagttgct
ttctctggtcttgaagaaaaaggagatatcaaatccgaggtttcagttacaccaatgaaa
gttttgcctccatggatgataaaggagggaatgaatcttacaaaggagcagcgtggagag
gtcaagcaagaatcaaatatggagggtccttctgctgcagcaggatcatctgatgacaag
aagtccataggatttgaagatgtgaagaatatacaggatgaatatattaaggcatattat
gaggctctattcaagcggcaaaaagagcaagaagaagctaccaaaatgttgccggaaaca
tcaactacagatggagtatataacacctttaccgagcgccaagttggcatgaaatccaaa
cgtgaagaggaggacgaaggagaggatgttgaatgggaggaggccccacctgcaggtaat
actacaactggaaatctcaaggtagacttgaatgttcaagcagatgcttcggaagacgac
aacgatgaagaagatgacatagactgggaagaaggttga
DBGET
integrated database retrieval system
