Solanum pennellii: 107015317
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Entry
107015317 CDS
T04130
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107015317
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107015317
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HH_signal
HVO_0758
Baculo_LEF5_C
DUF5377
Motif
Other DBs
NCBI-GeneID:
107015317
NCBI-ProteinID:
XP_015071038
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All DBs
Position
3:complement(59109334..59113748)
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AA seq
382 aa
AA seq
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MEKELIELFDAVKRSADAAAVDGGADSSPEEDRCLDALKRLKKFPVNYQVLVSTQVGKRL
RTLTKHPREKIQMLASDVVKNWKTIIVRETMKNKNGNEVNGESVKAECAGDDGDEGNKFQ
RLNSVKVEKVARVENVTVERSSKSLTLKSERAVKAESSFTDVKSENVSVMKTENTTSKSV
QIEKKPKDEKLRSHGASAAPPKLSALVYCKDPVRDKVRELLSEALCKVSVEVDDDDLRDA
VNGSDPYRVAVQVESAMFEKWGKSSGSQKFKYRSIMFNIKDPNNPDFRRKVLTGQYSPHS
IVDLSPEEMASDERQKENKKIKEKALFNSQLGGPPKASTDKFKCGRCGKNQTTYYQMQTR
SADEPMTTYVTCVNCDNRWKFC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctaatcgagctgtttgatgcggtaaagagatcggctgatgcagccgct
gttgacggcggtgcagattcctcgccggaggaggataggtgccttgacgctttgaagcgg
cttaagaaatttcctgtcaattatcaagtcctcgtttccacacaggtgggcaaacgcctc
cgaacgttgacaaaacatcctagggagaagatccagatgttggcttctgatgtagtgaag
aactggaagactataattgtgagagagacaatgaaaaataagaacggcaatgaagtaaat
ggggaatctgtaaaagctgaatgtgctggtgatgatggtgatgaaggcaataaatttcag
cgtcttaactcggtgaaggttgaaaaggtggcaagggttgagaatgtgacagttgagagg
tcaagtaagtctctgactctaaaatctgagagagcagtgaaggcagaaagttccttcact
gacgtaaagtctgagaatgtttctgttatgaagactgagaatacaacttccaaaagtgtt
cagattgagaagaaacccaaggatgaaaagttgagatctcatggggctagtgctgcccca
ccaaagttgtctgctcttgtttattgcaaggatccggtgagagacaaagttcgggagctc
ctttctgaggctctttgcaaagtctctgttgaagttgatgacgatgatttgagggatgct
gtgaatggttctgatccttatagagtggcagttcaggttgagtctgcaatgtttgagaag
tggggaaaatctagtggctcccagaagtttaagtataggtcaataatgtttaacatcaag
gatccaaacaatccagatttccggaggaaagtccttacaggacagtattcacctcacagt
attgttgatttgagcccagaagaaatggcaagtgatgaaaggcaaaaggagaataagaag
atcaaagaaaaagcgttatttaatagccagcttggaggtcctcccaaggccagcacagat
aagtttaagtgtggtaggtgcgggaaaaatcagaccacctactaccagatgcaaactcgg
agtgctgatgaaccaatgacaacctatgtcacatgtgtaaactgtgataatcgctggaag
ttctgttaa
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