KEGG   Solanum pennellii: 107015361
Entry
107015361         CDS       T04130                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
spen  Solanum pennellii
Pathway
spen04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:spen00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    107015361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spen04131]
    107015361
Membrane trafficking [BR:spen04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    107015361
   mTORC2 complex
    107015361
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_HPS5 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_IFT140_2nd Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_SPT8 Beta-prop_IP5PC_F Mala_s_1-like Beta-prop_WDR35_TULP_N Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 107015361
NCBI-ProteinID: XP_015071097
LinkDB
Position
3:24748594..24760249
AA seq 315 aa
MSQPSVVLATASYDHTIKFWEAKSARCYRTIQYPESQVNRLEITPDKRFLAAAGNPHIRL
FDINSNSPQPLRSFDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGSLIVAA
NNRGTCYVWRLLRGTETMTNFEPLHKLQAHDGYILKCLLSPELCEPNRYLATASSDHTVK
IWNVDGFTLEKTLIGHERWVWDCVFSVDGAFLITASSDTTARLWSTSTGKDIKVYQGHHK
ATICCALHDGPEPSS
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagtcaaccatcagtggtgctagcaacggctagctatgatcacactataaaattttgg
gaggctaagagtgcccgctgctatcgaactattcaatacccggaatcacaagttaatcgt
cttgaaattactccggataaacgcttcttggctgctgctggaaatcctcacattcgatta
ttcgacatcaactcgaacagtcctcagccactgaggagctttgattcacacactaataat
gtgatggcagtaggatttcagtgcgatggtaactggatgtattctggatctgaagatggc
actgtaaagatttgggatttgagagcaccaggttgtcagagggaatatgaaagtcgggca
gctgtgaacactgtagttttgcaccctaatcagactgagttgatatctggagaccaaaat
ggcaatatccgtgtgtgggatttgagagcaaattcatgtagctgtgagttggtaccggag
gtggatacagctgttcgttctttgactgtcatgtgggatggaagcttaattgttgctgca
aacaatcgtggaacatgttatgtttggcgtttactacgtggcaccgagacaatgaccaac
tttgagcctctgcataagttacaggctcatgatggttatatcctcaaatgtcttctttcc
cctgaactatgcgaacctaacaggtatctggcgactgcatcttctgatcatacagtcaag
atttggaatgtggatggctttaccttggagaaaactctgataggacacgaacgctgggtt
tgggactgtgtattctctgtagatggtgcttttctcatcacagcatcttctgatacaaca
gcaagattgtggtccacatctacaggcaaagatatcaaagtgtaccaggggcatcataaa
gcaacaatatgttgtgctctacatgacgggcctgaaccttctagctga

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