Solanum pennellii: 107015425
Help
Entry
107015425 CDS
T04130
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107015425
03400 DNA repair and recombination proteins [BR:
spen03400
]
107015425
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107015425
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Atypical E3
107015425
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107015425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
SLX1_C
Baculo_IE-1
PHD
zf-HC5HC2H
ADK_lid
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107015425
NCBI-ProteinID:
XP_015071177
LinkDB
All DBs
Position
1:complement(996138..1000485)
Genome browser
AA seq
314 aa
AA seq
DB search
MATLSWRHHTLIQALLSRGPLKEKDFQSIFTKIIGKSSGNHQSLFNEYLRKINGELAYVQ
LELRACRNQYDGHVHYGVVNNVSDESSKLGTKYSVPQIAFYKGIIEAIVQDAAAQGFIST
IDALNIRLENQFLAGTESQSQRGSTHIPAAFRNFSMSQKERTLEELARDRWLSLTDGKIG
LGVRSFLDLRSWFRSNEVPACEVCNEAAVKAELCKNEGCNVRMHMYCLRMKFSKSKAEKV
CPGCGTRWHYNIAKVEAVDEEEDASAPPESQQPREPSTRKRPRTRAAIDSDTVEPESSQS
TRLTRRSVRLKSSG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactttcatggaggcaccatacactaattcaagctctactctctcgtggtccg
cttaaagagaaggattttcaatctatattcaccaaaatcatcggcaaatcctcaggtaat
catcagtcactattcaatgaatacctgagaaagataaacggagagctcgcttatgtgcag
ttagagctacgggcatgtagaaaccagtatgacggacatgtgcattatggtgttgtcaac
aatgtttcagatgagtcatccaaacttggaactaaatattcagttccccagatagctttc
tataaaggcattattgaagcaattgttcaagacgcagcagctcagggatttatatcgacc
attgatgcactgaacatacggctcgaaaatcagtttctagctggaacagaatcccagtct
cagagaggttccacacatattcctgcagcgtttagaaatttttcaatgtctcaaaaggag
aggacccttgaggaacttgcgagggaccgctggctttctctaacagatggtaagatagga
ctaggagttcgttcgtttcttgatctcagaagttggtttcgcagtaatgaggttccagca
tgtgaagtttgcaatgaagctgctgtgaaggctgagctttgcaaaaatgaaggctgtaat
gttcgtatgcatatgtactgtctgagaatgaagttctccaaaagcaaggctgaaaaagtt
tgtcccggttgtgggacaagatggcattacaacattgcaaaagtagaagctgtagatgaa
gaagaggatgcatctgctcctcctgagagtcagcagcctcgtgaaccctcaacgagaaaa
aggcctaggacccgtgcagctattgactctgatactgttgagcctgaatcatctcaaagt
acaaggcttactcgacgctctgtccgtctgaagagttcaggttaa
DBGET
integrated database retrieval system
