Solanum pennellii: 107015430
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Entry
107015430 CDS
T04130
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
spen
Solanum pennellii
Pathway
spen04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107015430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107015430
03029 Mitochondrial biogenesis [BR:
spen03029
]
107015430
Membrane trafficking [BR:
spen04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107015430
Atg1 complex
107015430
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107015430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107015430
NCBI-ProteinID:
XP_015071179
LinkDB
All DBs
Position
3:63092945..63099801
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AA seq
604 aa
AA seq
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MDFQSNPQGEYGRFEQILAQFLLKTLHIVMDCRVPSIRPCGRSGEVKKSDKWFNLVLGDR
PAVLDNLNFWHRNLMEPMIIDIIIVQEKHSSLSEHSSGIAGAYTETIIERWVVQYEYMRT
MVPQIGDSSYKKTYKKSIILLRALYSMMRLLPAFKAFRKLSSSQSCDFDIIYKVSSFSAP
FSRVEEELMKHYTFTPVDAQQGRLCISVTYREDLSNFNLETAASFPPEIITDYVGSPLAD
PMRSFPSSSSNKGGHPTSFPSRGTHSSSSSPFQRPHSWTSGFLTSPSLPRTQPYVGSPPL
YRPPHELSSSPSDVHGHRVSPNNRLPIHHKATSFDEYQLSPPFSPSPSPSPPTYLSGANP
GQTRLRSGSGPVSIPHPMMGTSSRYLSPNLSDPNRHSLPPMSPRSIKHDSSSQESPSGIR
SFRKMDPLRTLESNIGTTSPGQKISRDARDDSGRFSGLLSSSGSPRLFSRSSSRLSFQDD
LDVCDFSCPFIVDDVDTSDSQASEILDGRKGSEISSQGSATARKSQDAAVGALVHMLRTA
PPLRQDSSCYTSNSIKTELDGELSTASGFFISRKASDALEELKTYKDLKDLLLSKSATRS
VSEG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagtaatccacaaggtgaatatggaaggtttgaacagatacttgctcaa
tttctgctgaaaaccttgcatattgttatggattgtagagttccttctatacgcccttgt
ggacgtagtggggaagtgaaaaagagtgacaagtggttcaatttggtgttgggagatcgg
cctgctgttctggataatttgaatttttggcataggaatttgatggaaccaatgataata
gacataataattgttcaagagaaacatagttcgttgtcggagcatagttcaggtattgca
ggggcatataccgaaaccattatagagaggtgggttgtacaatatgagtatatgaggaca
atggttcctcaaattggtgattcgtcttataagaaaacatacaagaaatcaattatactg
ctccgcgccctttattcaatgatgagactccttcctgcattcaaggccttcaggaaactt
tcatcaagtcagagttgcgactttgatatcatttacaaagtctcttcatttagtgctcca
ttctccagggtagaggaggagttgatgaagcactatacttttactccagttgatgcccag
cagggccgtctttgtatatctgtgacatatcgtgaagatctgtcgaactttaatctggag
actgctgcatcctttccacctgagatcattacagattatgtaggcagtccacttgctgac
ccgatgaggtcatttccatcctcctcgtctaataagggtggacaccctacatcatttccg
tcgagagggacacattcatcttcttcatcacctttccagcgcccacacagctggacaagt
ggtttcctcacgtcaccttctttacctcggacacagccatatgtaggatctccacctctg
taccggccaccgcatgagctttcatcttcacccagtgatgtacatggacacagggtttca
cctaacaatagactgcccattcaccacaaagcaacgagctttgatgaataccagctttca
cctccattttcaccatctccatctccatcgccaccaacatatctttcaggtgcgaatcct
gggcagactcgtttgcgttctggatctggccccgtcagtatccctcatccaatgatgggt
acaagttccagatacctatctcctaatttgtctgatccgaacagacattctcttcctcca
atgtctcccagaagtataaagcatgattcatcatcccaagaatccccttcaggtatcagg
tcattcaggaaaatggatccactgaggactcttgaatcgaatatcggcactaccagtcct
ggacaaaagatttccagagatgctagagatgattcaggacggttctctggtttgctatct
tcaagtggttcgccacgtttattttctagaagttctagcagactatcttttcaagatgac
ttggatgtctgtgatttttcctgtccttttattgttgatgatgtcgacacttccgattct
caagccagtgagatccttgatgggagaaagggttcagaaatctcttctcagggatctgca
acagccagaaaatcccaagatgcagctgtaggtgcccttgttcacatgctgagaactgct
cctcctttgcgccaagattctagctgttatacctcgaatagcataaagactgaactggat
ggagaacttagcactgcatctggatttttcattagtagaaaggcatccgatgcgttggag
gagctcaaaacttataaagatttgaaagatctactgttgtccaagagcgcaacccgttca
gtcagtgaagggtga
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