Solanum pennellii: 107015443
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Entry
107015443 CDS
T04130
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
spen
Solanum pennellii
Pathway
spen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107015443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107015443
03036 Chromosome and associated proteins [BR:
spen03036
]
107015443
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107015443
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107015443
PBAF complex
107015443
GBAF(ncBAF) complex
107015443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
UPF0167
NPV_P10
SNAPC3
DUF919
Motif
Other DBs
NCBI-GeneID:
107015443
NCBI-ProteinID:
XP_015071195
LinkDB
All DBs
Position
3:complement(63826540..63838052)
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AA seq
573 aa
AA seq
DB search
MDASRLYKSSNELAHDLYTIPSYTSWFSWQSIHEVERLSLREFFDGSSVTRTPRIYKEYR
DYMITSYREDPTRRLSFSDIRKSLVGDISVLHKVFTFLEKWGLINFDPSNAETPAAIHAP
AEEDKEDEKWRIRVEEGTPHGVRVVAAPHSLKPLAPVPSPVITGHRGAGKGRGGVTVDNI
PKFSPMASYLDVYGELVGQQKEESVVCLSCKELCASGHYEYSKDASSNLCEKCFKSGNYD
KNKFADEFKPIDGANPKANWTEAETLLLLESVLKHGDDWDLVTQNVKTKSKLDCISKLIQ
LPFGDLMLGSIHKKFNLLDKNCEVRGVNQAQPAISESRETPGNQSHEQNQERQQNGNAEC
GTPPLKKIRRAPVSEDSSFLMKQVAHISGAVGPHIAASAAEAAVTALCYENQCSTDIFDG
DDNGLGSIADISETERTSQVVGAEGEEKHVRSETEVEVSQRNSISLTLRTRAATATAIGA
AAAHAKLLASQEEREIEYLVSTLVEAQVKKLKRKMKHVEALNLMMEKQHGQMKDLEESLV
TERMDILQKIFSSGVSRWRDHASVKSQSSTSSI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcgcttgtataaatcctccaacgaactcgctcacgacctttatacaatc
cctagttacaccagttggttttcttggcaaagcatacatgaggtggaaaggttgtcattg
cgagaattcttcgatggcagttcggttacaaggacacccagaatctacaaagagtacagg
gactacatgattacctcataccgtgaggatccgactcgaaggctttcgttttccgatatc
cggaagtcgttggtgggtgatataagtgtgctacacaaggtttttacctttttggagaag
tggggtttgattaattttgaccctagtaatgctgaaacgccggctgctattcatgctcca
gcggaagaggataaggaggatgagaagtggaggattagggttgaagaagggaccccacat
ggggttagggttgtggcagctcctcattctttgaaaccccttgcaccggttccgtcaccg
gttatcacagggcacagaggtgctggaaaggggaggggtggtgttacggtggataatata
ccaaagttttcgcctatggcatcgtatttagatgtttatggggagttggtggggcagcag
aaggaggaaagtgtagtctgtctgagttgtaaagaactgtgtgcttcgggtcattatgag
tacagcaaggatgcgagctcgaatttatgcgagaagtgttttaaaagtggtaattatgac
aaaaacaaatttgcagatgaattcaagcccatagatggtgcgaaccctaaagccaactgg
accgaagccgaaactttactcctattagaatctgtactgaagcatggtgatgactgggat
cttgtcactcaaaatgtcaaaacgaagagtaagctggattgtatctccaagcttatacag
ttgccatttggggatcttatgcttggctctattcataaaaagtttaatcttttggacaag
aattgtgaggtaaggggcgtgaatcaagctcaacctgcaataagtgagtctcgagaaact
cctggaaatcaatctcatgagcagaaccaggagcgtcaacagaatggaaatgctgaatgc
ggaacccctcccctcaagaaaatacgcagggctccagtttcagaagacagtagtttcctg
atgaaacaggtagctcacatttctggtgctgttggtccacatatcgcagcatctgcagct
gaggctgctgttacagccctttgctatgagaatcagtgttcaacagacatttttgatgga
gatgataatggattgggatcaattgctgatatcagcgagacagagaggacaagtcaagtt
gtaggtgctgaaggggaagaaaagcatgtcagatcagaaacagaagtggaagtctctcag
aggaacagtatatcactaactttacgtacgagggccgcaactgctactgctataggtgct
gctgctgctcatgccaaattgttggccagtcaagaagagagagaaatagaatatctggtt
tctactttggttgaagcacaggtgaagaagttgaaacgcaaaatgaaacatgttgaagct
ctgaacctgatgatggagaagcagcatggccaaatgaaggatctagaagagtctttagtt
acggagagaatggacatcttgcagaagatatttagttccggggtatctagatggagggat
catgcttcggttaaatctcaaagcagcaccagcagcatataa
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