Solanum pennellii: 107015467
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Entry
107015467 CDS
T04130
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
spen
Solanum pennellii
Pathway
spen00531
Glycosaminoglycan degradation
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107015467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spen00536
]
107015467
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107015467
Glycosaminoglycan binding proteins [BR:
spen00536
]
Heparan sulfate / Heparin
Enzymes
107015467
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107015467
NCBI-ProteinID:
XP_015071228
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All DBs
Position
3:complement(69617379..69622551)
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AA seq
540 aa
AA seq
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MNFRTLLLIFLALCPALSSQTVKEIVLTIDASTKVAWTDANYICATIDWWPKEKCNYKQC
PWGSASILNLDLTHPYLENAIRAFKGLRLRLGGSLQDQVIYGVGNLISRCRPFTQQKDGL
FGFSKGCLPMQRWDELNNLFKKTGALVTFGLNALYGRRQANRHVWVGNWDSSNALNFIKY
TVAKGYHIHSWEFGNELSGSGIGARVDAAQYGKDVIQMHNLLNQAYQNTPERPLLLAPGG
FYDPGWFGKLLQVSGHGTVNVLTHHIYNLGPGSDSKLVDKILNPEYLSRTEGTFSSLTQT
ILRNGPWASAWVGESGGAFNSGGPDVSNAFVDSFWYLDQLGMAAKHHTKVYCRQTLIGGN
YGLLDTATFVPNPDYYSALLWNRLMGKVVLGVVNSAAPHLRTYAHCTKDRAGVTLLLINL
STQIQYQVNIHSTAETSLQVGKKMDHNKKSFARSIKQSVSWVGIKSSDVTLSREEYHLTP
EGGNIRSRTMLLNGKLLQLTETGDIPSLSPVFTNLNSPISIEPLSIKFIVFPNFISPSCT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagaaccttgttgttaatctttttggcactatgccctgcactttcatcacaa
acagttaaagaaatagtacttacgattgatgcatctacgaaagttgcctggacagatgct
aattacatttgtgctaccattgattggtggcctaaagagaagtgtaactacaagcaatgt
ccttggggttcagcatccattctaaatctggatttaactcatccatatctggagaatgct
atacgagctttcaagggtttgagattacggcttggaggttctttacaagaccaagtaata
tatggcgttggcaacttaatatctcgttgcagaccattcacccagcagaaggatgggttg
tttggattctctaagggatgcttacctatgcagagatgggatgagctaaataaccttttc
aagaagacaggagcacttgtgactttcggcttgaatgcactgtatgggagacgacaggca
aataggcatgtgtgggtaggaaattgggattccagcaatgcccttaatttcataaaatac
actgttgccaagggctaccacatacactcgtgggaatttggaaatgaattgagtggtagc
gggattggtgcaagagttgatgctgcacagtatggaaaagatgttatccagatgcacaat
ctcttaaaccaagcatatcagaacacccccgaacgtcctctactattagcaccaggagga
ttctatgatcctgggtggttcggcaagctccttcaggtttcaggacatggcactgtcaat
gtcttgacacatcatatttataatcttggcccggggtccgacagcaagctagtggataaa
attttaaatcctgaatacctgagtagaacagaaggcacgttcagcagtcttactcaaacc
attctaagaaatggtccttgggcttcagcttgggttggagaatctggtggagccttcaac
agtggaggtcctgatgtgtctaacgccttcgtagatagcttttggtacttagatcagctt
gggatggcagccaagcaccatactaaagtatactgcagacagacgcttataggtggaaat
tatgggcttcttgataccgctacttttgttccaaatcctgattattatagtgcacttctt
tggaatagactgatgggaaaagtcgttcttggtgttgtcaacagcgcagcaccacatttg
cgcacttatgcccactgtacaaaagatagagcaggtgtgactttacttctgataaattta
agcacccagattcagtaccaagtcaacatccactctactgcagaaaccagcttgcaagtt
ggtaaaaaaatggatcacaacaagaagtcattcgcgcgcagtattaaacaaagtgtttcg
tgggtaggaatcaaatcatcagacgttacactatcgcgagaagaataccatctaacacca
gaaggtggcaacattagaagcagaacaatgctcctcaacgggaaattattgcaactcaca
gaaacaggagacattccaagcttgtctccagtctttacaaatctcaactctccaatatct
attgaaccattgtccatcaagttcattgtttttcctaattttatttctcccagttgtaca
tag
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