Solanum pennellii: 107015510
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Entry
107015510 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107015510
04121 Ubiquitin system [BR:
spen04121
]
107015510
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107015510
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107015510
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107015510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-Nse
zf-C3HC4_3
zf-RING_16
Anti-TRAP
zf-RING_5
Prok-RING_1
zf-RING_10
zf-RING-like
zf-RING_Vps41
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
107015510
NCBI-ProteinID:
XP_015071302
UniProt:
A0ABM1GHX0
LinkDB
All DBs
Position
3:65138257..65142070
Genome browser
AA seq
383 aa
AA seq
DB search
MSSAGADGGGGAAGNQPQNYHCYQCEQTVTITPSPNSELSCPNCNGTFLEESETAPPSNP
NPNTHPFFSAATTDDLPFGGGFPIVFSSNAASPAGGAVGFDDLSALFGGMAGGSAGLPGR
SPNQFDPFAFLNNYFSSMRGGNIQLIFENHPDGGGGGAGGDFRIPGNLGDYFLGPGLEQL
IQQLAENDPNRHGTPPAAKSAVAGLPDIKITEELLDSDSSQCAVCKDTFELGMEAKQIPC
KHIYHKDCIMPWLELHNSCPVCRYELPTDDPDYENRKTSQQQTANTSNTNTNTSNNNTNN
NNTGVMFGGLEGGGDQDSSQTSSSGERRLRIPLQWLFRGLGSPAETSNSGGATNDANNRN
NNNAPSGESNPGSGGQPRQEDLD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggccggagcagatggtggcggaggcgctgccggaaatcaaccacagaattac
cattgctaccaatgtgaacagacagttaccattacgccatcaccaaattcagagctctca
tgcccaaattgcaatggtacgtttttagaagaatcggaaaccgcaccaccttccaaccct
aatcctaatactcatcccttcttctccgccgccactaccgatgacctaccttttggaggt
ggatttccgattgttttctcttcaaacgctgcttcacctgccggtggtgctgtcggtttt
gatgatctttctgctttatttggaggtatggctggtggttccgctggtttaccaggtcga
tcccccaatcaatttgaccctttcgctttcctaaacaactattttagtagtatgaggggt
gggaatattcagttaatcttcgagaatcatcctgatggaggcggtggtggagctggtggt
gattttaggattccggggaatctaggtgactattttctagggcctgggcttgagcaattg
attcaacagcttgctgaaaatgatccaaatcgtcatggtacacctccagctgcaaagtcg
gctgttgctgggcttccagatattaagatcactgaggagttgttggattctgattcatct
caatgtgcagtttgtaaagatacttttgaactcggcatggaggcaaagcagataccttgc
aaacatatataccataaggattgtataatgccatggctggagttgcacaattcttgccca
gtgtgtcgatatgagctgcctactgatgatcctgattatgagaacaggaagacatcacag
cagcagactgccaatactagtaatacaaatacaaacactagtaataataataccaacaac
aacaatactggtgtgatgtttgggggtttagaaggtgggggagatcaggacagttctcag
acatctagttcaggggagaggaggcttaggataccattgcaatggcttttcaggggactt
ggatcacctgctgagacgagcaacagtggaggagcaaccaatgatgctaacaatcgcaac
aacaacaatgctcctagtggggagtctaatccaggttctggagggcagccgaggcaggag
gatctcgattaa
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integrated database retrieval system
