Solanum pennellii: 107015589
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Entry
107015589 CDS
T04130
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107015589
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
107015589
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107015589
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
MetW
Ubie_methyltran
CMAS
Methyltransf_9
DUF7408
Motif
Other DBs
NCBI-GeneID:
107015589
NCBI-ProteinID:
XP_015071389
LinkDB
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Position
4:70095991..70099207
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AA seq
388 aa
AA seq
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MLFGVGTARLFCFEGIYTKSTVIVGYIFRTRSFSTMNEVGIDSASSLHTVKSVGEAPVLR
PVSVKAKCSSNVQSTPEIEKKYVHGVYDAIAPHFSSTRFAKWPKVSAFLSSLSPGSLILD
AGCGNGKYLGLNPDCFFIGCDISAALINICADKEQEVLVADAVNLPYRTGYGDAAISIAV
LHHLSTESRRRKAVEELVRVVKKGGCVLITVWAREQEDSSLIEKWTPLNQRYVEEWIGPG
SPRVRNPSSPRILESIPEAEENSAGEQLKGLHANSSKVKSAEVMHPTSLDEGHSLPTGSG
KGYLEQQEFFVPWHLPYHRAEVSGASAVALASGLAKKDDKKGSVVYNRYYHVFSEGELER
LVAGLDNAILVDRFYDKSNWCIILEKTS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgctctttggtgttggaacggcaaggttattttgttttgaaggaatatatactaaatct
actgttatagttggttatattttccgtacaagaagttttagtacgatgaacgaagttgga
attgatagtgcatctagtttgcatacagtgaaatctgtgggagaggctcctgttctacgt
cctgtgtcagtgaaagcaaaatgttcttcaaacgttcaatcaaccccagaaattgaaaag
aagtatgtccatggtgtttatgatgccattgctccccatttcagttccactcggtttgcg
aagtggcctaaagtgtcagctttcttaagctcattatctcccggttctctcatcttagac
gctggttgtggaaatgggaaatacttaggattaaatcctgattgtttcttcattggctgt
gacattagtgcggctcttattaatatatgtgcagataaagagcaggaagttttggttgca
gatgctgtgaacctaccatataggactggttatggtgatgcagcaatttctatagctgtg
ttgcatcaccttagtactgaaagtaggaggaggaaagcggtagaggagcttgtccgtgtt
gttaaaaagggcgggtgtgttctaattactgtctgggctagggagcaagaagacagttca
ctgattgaaaagtggactccacttaaccaaaggtatgtagaggaatggataggaccaggg
agtcctcgagttcgcaacccttcatctcctcgtatccttgaaagcatcccagaagcagag
gaaaatagtgcaggggagcagttgaaaggtctacatgcaaactcttctaaagtaaaatca
gctgaagttatgcacccaacatctctggatgaaggtcattctttgcctactgggtctgga
aaaggttatttagagcagcaggaatttttcgttccctggcacttaccttatcatcgagct
gaagttagtggggcttcagctgttgccttggctagtggtttggcaaagaaagatgataag
aagggctctgtggtatacaatagatattaccatgtttttagtgaaggtgaacttgagagg
ttggtggctggtctagacaatgccattcttgttgatagattctatgataaatcaaattgg
tgcatcattcttgagaaaacatcgtga
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