Solanum pennellii: 107015696
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Entry
107015696 CDS
T04130
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
spen
Solanum pennellii
Pathway
spen03430
Mismatch repair
spen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107015696
03460 Fanconi anemia pathway
107015696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
107015696
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107015696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Skp1
Motif
Other DBs
NCBI-GeneID:
107015696
NCBI-ProteinID:
XP_015071531
UniProt:
A0ABM1GII5
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Position
4:complement(40701157..40741538)
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AA seq
737 aa
AA seq
DB search
MENEESIIEVEMEDEAIPVPIAKEPPKIQRLEECVVNRIAAGEVIQRPVSAVKELIENSL
DADSTSICVVVKDGGLKLIQVSDDGHGIRYEDLPILCERYTTSKLSKFEDLQSIRSMGFR
GEALASMTYVGHVTVTTITMGQLHGYRATYRDGLMVDEPKACAAVKGTQIMIENLFYNMA
ARRKTLQNSADDYPKIVDIISRFGIHHTHVSFSCRKHGAGRADVHTIATSSRLDAIRSVY
GASVARNLMNIEVSDTGPLISVFKMDGFISNSNYIAKKTTMVLFINDRLIDCGALKRAIE
IVYTATLPKASKPFIYMSIILPPEHVDVNIHPTKREVSFLNQEFIIEKIQSVVGSKLRSS
NESRTFQEQTMDLSSSSPMATSKDSTKESSPSGIKSQKVPHMVRTDTLDPSGRLHAYMQM
KPPGNSERGPCFSSVRSSIRQRRNPSDTADLTSIQELVNEIDNDCHPGLLDIVRNCTYTG
MADEIFALLQHNTHLYLVNVINLSKELMYQQVLRRFAHFNAIQLSEPASLPELVMLALKE
EGTDPEGNESKELRGKIAEMNTELLKQKAGMLEEYFSIHIDSNGNMSSLPVILDQYTPDM
DRIPEFILCLGNDVDWEDEKICFQTIAAALGNFYAMHPPLLPNPSGDGLKFYRKRVLSSG
SEVTSIDNIENDTTEAEFEEELRLEAENAWAQREWSIQHVLFPSLRLFFKPPTSMVTNGT
FVQVASLEKLYRIFERC
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaagagagtattattgaagtggaaatggaagacgaagccattccagtgccg
attgcgaaggagccaccgaagattcagcggctggaagaatgtgtggtgaacagaatagcg
gctggcgaagtcatccaacggccagtctctgccgtgaaagagctcattgagaacagcctg
gatgctgattccacctctatttgcgttgttgttaaggatggtggtcttaaacttatccaa
gtttccgacgatggccatggaatccgttatgaagatttgccaattttatgcgagaggtat
actacgtccaagctgagtaaatttgaagatttgcagtccattaggtcgatgggatttaga
ggagaagccttggctagcatgacatatgtgggtcacgtcactgtcaccaccattactatg
ggccagttgcatggatacagggcaacatatagagatggtttgatggtggatgagccaaag
gcttgtgctgctgtcaagggtacccagataatgattgaaaatttattttataacatggct
gcgcgaaggaaaacccttcaaaattctgccgatgactatccaaaaattgttgacattatt
agtaggtttggaattcatcacacacatgtgagcttctcttgtagaaagcatggagctggt
agagcagatgttcacactattgctacttcttcaaggctcgatgcaattagatccgtttat
ggagcttcagttgctcgaaatctgatgaatatcgaagtttctgatactggtccattaatt
tcagtttttaagatggatggtttcatctccaactctaattatattgcgaagaagacaaca
atggtgctttttataaatgatagactcattgattgtggtgctttgaagagggcaattgaa
atagtctatactgcaacattgcctaaagcatcaaaacctttcatatacatgtcaatcatt
ttgccgcccgagcatgttgatgtgaatatacacccaacaaagagagaggtaagctttttg
aatcaagagttcatcattgagaagatccagtctgtagtagggtcaaaattgagaagctcc
aatgagtcgaggacattccaggaacagactatggatttatcttcatctagtccaatggcc
acaagtaaagattccactaaagaatcgtctccttctgggataaagtcacaaaaagtgcca
catatggtacgaacagatactttggacccttctggaaggctgcacgcttacatgcaaatg
aagcctcctggtaattcagaaagaggtccttgctttagctctgtgaggtcttctatcaga
caaaggaggaatcctagtgacaccgcagacctcactagcatccaagagctcgttaatgaa
attgataatgactgtcaccctggtctattggatattgttaggaattgcacatatactggg
atggcggatgagatttttgctttgcttcaacacaatacacacctttatcttgttaatgtg
attaacttgagtaaagagcttatgtatcagcaagttttacgtcggtttgcccatttcaat
gcaattcaactgagtgaaccagcatcattacctgagttagtaatgcttgctctgaaagaa
gagggtacagatccagaaggcaatgaaagcaaagagctaagaggaaagattgccgagatg
aatacagaactgctcaagcaaaaggctggaatgctagaggagtattttagtattcatatc
gattcaaatggaaatatgtctagtcttcctgttatactggatcagtacacacctgacatg
gaccgcatcccagaatttatactttgtttaggaaatgatgttgactgggaggacgagaaa
atttgttttcagacaattgctgctgccctaggaaacttttatgccatgcatccgccatta
ttgcctaatccctcaggtgatggcttgaaattctacagaaagagagtgctttcaagtggt
tcagaagtaacttcaatagataacatagagaatgataccacggaggctgaatttgaggaa
gaactacgtttggaggctgaaaatgcctgggctcaacgtgaatggtcaattcagcatgtt
ctgtttccctccctcaggctcttcttcaagccccctacttccatggttacaaatggaact
tttgttcaggttgcatcactggaaaagctctacagaattttcgagagatgttaa
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