Solanum pennellii: 107015722
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Entry
107015722 CDS
T04130
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
spen
Solanum pennellii
Pathway
spen04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107015722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107015722
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
107015722
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107015722
NCBI-ProteinID:
XP_015071580
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Position
4:complement(75586391..75591787)
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AA seq
397 aa
AA seq
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MGSGEPSRTSTNAGNSDGGGASTSGSSVKRFPLAAQPEIMRAAEKDDQYASFVYEACRDA
FRHLFGTRVAVTYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQVAGPYGLSPTPARR
ALFIFYQSAVPYIAERVSSRAASHGITLADSMVDYAFRDDPTSSNEAEASPTFEIRSSST
STPSISAFSRLKAKIRDFWLYTVRRWPSMLPLAREILQLVIRANLMFFYFEGLYYHISKR
AAGIHYVFIGKPMNQRPRYQILGVFLLIQLCILAAEGLRRSSLSSVSTSAQQAPFGTYQT
SAGRGLPVLNEEGNLITAETEKYGLVAESTSTSESQGNSPSKCTLCLSSRQHPTATPCGH
VFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLYHSDF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgggagaaccttctagaacttcaaccaatgccggaaacagtgacggcggtggc
gcatcaacttccggcagcagcgtcaagagatttccgctcgcagcgcagccggagattatg
agagccgccgagaaagatgaccagtatgcctccttcgtctatgaagcttgccgtgatgct
tttcgtcacctcttcggtacaagagtagctgtaacttaccagaatgaggcaaaactctta
gggcagatgctctattatatgctgacaacaggtgcagggaagcaaacattaggagaagaa
tactgtgatatcactcaggttgcaggaccatatggactttcgccaacacctgcaagacgt
gctctttttattttctatcagtcagctgttccatatattgcagaaagagtcagttctaga
gcagcttcccatggcatcaccctggctgattcaatggtggattatgcatttagggatgat
cctacttcaagcaacgaagctgaggcatcacccacttttgagatacgctcatcttcaaca
tccactccatcaatttcagctttttcaagattgaaagccaagataagggatttctggttg
tatacagttcgaaggtggccttcgatgcttccccttgctcgtgaaatcttgcaattggtt
atccgggccaatctcatgttcttctattttgaaggactttattatcatatatcaaaacgt
gctgcaggcatacactatgtgttcattggaaaacctatgaaccagcgacctagatatcaa
atactaggggtcttccttctaattcaattatgtattcttgctgctgaaggtctgagacgt
agtagtttatcatcggtttcaacttctgctcaacaagcaccctttggaacctatcaaact
tctgcaggccgaggtttacctgttttaaatgaggaaggcaatctaataactgcagaaact
gagaagtatggattggttgctgaatccacatcaacctcagagtctcaaggaaacagtcca
agcaaatgtacgctttgcctaagcagccgccaacatccaacagccacaccttgtggtcat
gtattttgctggaactgcataatggaatggtgcaatgaaaagcctgaatgtcccctttgt
cgttctcccgtaacacattcaagcttggtttgtctgtatcattcagatttttag
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integrated database retrieval system