Solanum pennellii: 107015812
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Entry
107015812 CDS
T04130
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
spen
Solanum pennellii
Pathway
spen00900
Terpenoid backbone biosynthesis
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Module
spen_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107015812
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
spen01006
]
107015812
Enzymes [BR:
spen01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
107015812
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
107015812
2.5.1.29 geranylgeranyl diphosphate synthase
107015812
Prenyltransferases [BR:
spen01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107015812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
107015812
NCBI-ProteinID:
XP_015071715
UniProt:
F1C933
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All DBs
Position
4:complement(74836843..74838162)
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AA seq
363 aa
AA seq
DB search
MRSMNVVDSWVQACLVINQSLPYNSFNGLMKINLKNRKFLKQSLCYRPFSSVTVSAIATN
EKVVMEKEEFDFKVYVAEKAICVNRALDEAIMVKDPPMIHEAMRYSLLAGGKRVRPMLCF
AACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLA
GDALLAFAFEYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEM
LEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSE
LGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIAN
RQN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagatctatgaatgttgttgattcatgggttcaagcttgtttagttatcaatcaatct
ttaccttacaattcgtttaatggattgatgaaaatcaatttgaaaaatcgaaaatttttg
aaacagagtttatgttatagaccattttcatctgtaactgtttcagctattgctaccaat
gagaaagttgttatggaaaaagaagaatttgatttcaaggtttacgtagctgagaaggcg
atttgtgtaaatagagctttggatgaggctataatggtaaaagacccacctatgatccat
gaagcaatgcgttattcgcttctcgccggcgggaagagagtccggccgatgctctgtttt
gctgcctgtgaacttgttgggggaaaccaagggaatgctatggcggctgcttgtgctgtt
gagatgatacatactatgtctcttattcatgatgatttgccttgtatggatgacgacgat
ctccgccgtggaaagccgacgaatcataaagtgtacggtgaggatgtggcggtcctcgcc
ggagatgcgctacttgctttcgcattcgagtacctcgctaccgctacaatcggagttcct
ccgtcgaggatcctcgttgctgtcgccgaattggcgaaatctgttggaacggaagggtta
gtagctggacaagtagcggatttagcttgtactggtaaccctaatgtgggattagaaatg
cttgaattcattcacatacacaaaacggcggcgttgctagaagcttccgttgtaatcgga
gcaatcctcggcggcggagctgatgaagaagtggataagttaaggagatttgcccgatgc
atcggtttattgtttcaggtagttgatgatatccttgacgtgacaaagtcgtcgtcggag
ctcggaaaaaccgccggaaaagatttggcggttgataaaacgacgtatccgaagctgctg
ggattggaaaaggctaaggaatttgcggcggagctcaacggcgaagctaaacaacagctg
gcggcgtttgattcacacaaagctgctccattgattgctttagcagattacattgctaat
cgtcaaaattag
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