Solanum pennellii: 107015848
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Entry
107015848 CDS
T04130
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107015848
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107015848
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
PspA_IM30
CCDC84
RICH
Motif
Other DBs
NCBI-GeneID:
107015848
NCBI-ProteinID:
XP_015071752
UniProt:
A0ABM1GJ35
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Position
4:complement(64188880..64195073)
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AA seq
513 aa
AA seq
DB search
MNSILNEQTLTDKLSKLNTTQQCIETLSHWCIFHQDKAELVVTTWGKQFHSSEMTKKVPL
LYLANDILQNSKRKGNEFVIEFWKVLPAALKEIVGKDDEHGKNVVSRLVKIWEERKVFGS
QTHSLKDVMLGEELPPPLELGKKRSRSVKIVKRDTRSIRTKLTVGGTAEKIVSALHLVVS
EHSTEDEEMSKCKSAVHHVRKMEKDVDMALARAKHPMRKTLSKELEEEERMLKQSIEKLK
VVETNRLALVSQLREALTEQESELENVRTQIQVAEAQAGEASNMRKYLDDEDYVGERKPL
GTTTSPDIYGKAGETSKKTAAAIAAEVADKLTASSSSQYIMSSVLSTFAAEAAKSAGLAK
PSSYLTTNSYISQPENALSDSNALMSAQLPNPPPSNPYQSMLAPHPTVHQGQYHSLANPT
SQQYLQPSAGMMSPYSYGSIAALPSVPPPPPPPAPPSYMTMTQQPLSMMQQGAAAQQQQP
PLPQQPPPPNFRPVTPVQPPGMLYYSQPYHSQQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtattttgaatgaacaaactcttacagacaagctttcaaagcttaacaccact
cagcagtgcattgaaacattgtcccattggtgcattttccaccaagataaagcagagctg
gttgttacaacatggggtaaacagttccacagttccgaaatgactaagaaagtcccttta
ctgtaccttgcaaatgacatcctgcaaaacagcaagcgtaaaggaaatgagtttgtcatc
gagttttggaaggttcttcctgcagcactcaaggagattgtcggaaaagacgatgaacat
ggaaagaatgtagtttccagattggttaaaatatgggaagaaaggaaggtttttggatct
caaacacacagcctaaaagatgtaatgcttggagaagagctgccaccaccactggagctt
ggaaaaaagcgaagtcgttctgtcaaaatagttaaaagggacacgcggtccataagaacg
aaattgactgttggaggaacagctgaaaaaatagtgtcagcattgcacttggtagtcagt
gagcattctactgaagatgaagaaatgagcaaatgcaagtctgctgttcaccatgtgcga
aagatggaaaaggatgttgacatggcccttgcaagagcaaaacatccaatgcgaaaaacc
ttgtccaaagaactggaggaggaagaaaggatgttgaaacaatccattgagaaactaaaa
gttgttgagaccaatagattggcccttgtttcacagttaagggaagcattaactgaacag
gaatctgaactagagaacgttcggactcagatacaggtggcggaagcacaggcgggggaa
gccagcaacatgcggaagtatctggatgatgaagattatgtgggagaaagaaagcctttg
ggtacaacaacttcaccagacatctatggaaaagcaggagaaacaagcaagaaaacagct
gcagcaatcgcagctgaggtagctgacaagcttacagcttctagctcctctcagtatatc
atgtcgtccgtgctctctacatttgctgctgaggcagcaaaatctgccgggcttgcaaaa
ccttcatcatatctgaccaccaacagttacatttcacaaccagaaaatgctctatctgat
tcaaatgctttaatgtcagcacagctacctaatcctcccccaagtaacccgtatcagtcc
atgctggctcctcatcccacagtgcatcagggtcagtatcattcacttgctaatccaacg
tcccagcagtatttacagccatcagcaggaatgatgagcccttatagttatgggagtatt
gctgccttgccatctgtaccacctccaccacccccaccagcacctccgtcgtatatgact
atgacacagcaaccattgtcgatgatgcagcagggtgcagcagcacaacagcaacaacca
ccattacctcaacaacctccccctcctaatttccgtcctgtcacacctgtccagcctcct
ggaatgctgtactattctcaaccatatcattcacaacagtga
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