KEGG   Solanum pennellii: 107015849
Entry
107015849         CDS       T04130                                 
Name
(RefSeq) cyclin-H1-1-like
  KO
K06634  cyclin H
Organism
spen  Solanum pennellii
Pathway
spen03022  Basal transcription factors
spen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107015849
  09124 Replication and repair
   03420 Nucleotide excision repair
    107015849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107015849
   03400 DNA repair and recombination proteins [BR:spen03400]
    107015849
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107015849
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107015849
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 107015849
NCBI-ProteinID: XP_015071754
LinkDB
Position
4:70538519..70544817
AA seq 327 aa
MADFVTSTHRTKWIFTPQDIKHKYKVANHRAKQALEKYGTTRMEVDIDGSFSYAESQNDA
KDNAEKRPKPLKVEEEQLLKAFYEFKIQDVCDAFKFPRKIQATALIYFKRFYLQWSVMEH
HPKDIMLTCIYAACKAEENHVSAEELGKGIGQDHHVILNNEMLVFQSLGFDLIVYSPYRA
LEGFISDLEEFCGAKDEDQLVALKGSLDTARTEADKIMRSDGPLLFPPGQLALTALHRAN
AVHSIFDFERYLRSVLSRYQPAHAISELTGSINAIDSLIGKLLTPTSKDVKHVDRKLKSC
LDPGSHDKSKKRKHRSKDSSHEATDLY
NT seq 984 nt   +upstreamnt  +downstreamnt
atggctgattttgtgacatctactcatagaaccaagtggatttttactccccaagatatt
aaacataagtataaagttgctaatcacagagcgaaacaagcactggagaagtatggaaca
acgcgaatggaagttgatattgatgggtcgttctcgtatgctgaaagccaaaatgacgcc
aaagataatgctgaaaagcgtcctaaaccactcaaggttgaagaagaacaacttctaaag
gctttctacgagttcaaaattcaagacgtctgtgatgcctttaagttcccacgtaagatt
caggcgacagctctcatttattttaagaggttttatctacaatggtccgtgatggaacat
caccccaaagacattatgttaacctgcatatatgcagcttgcaaggcagaggaaaaccat
gtatcagctgaggagcttgggaagggtattggacaggatcatcatgtaatcctcaacaat
gagatgctggttttccagagtctaggatttgatctaattgtttactctccatatcgtgct
cttgaaggttttatcagtgatttagaggaattctgtggagctaaagatgaagaccagctt
gtggctctgaagggttcacttgatactgctaggactgaagcagataagattatgcgttct
gatggaccacttcttttcccacctgggcagttggcattgacagctttacatagagctaac
gcagtgcatagcatatttgattttgagaggtacctaagaagtgtcctatcacgttatcag
ccagctcatgccatttcagaacttactggttctataaatgccattgattctttgattggt
aaacttttgactccgacctccaaagatgtgaagcacgttgatcggaaactcaaatcatgt
cttgatccgggttcacatgacaagagtaaaaaaaggaagcatagatccaaagatagctca
catgaggctactgacttatattga

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