Solanum pennellii: 107015978
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Entry
107015978 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107015978
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107015978
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107015978
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
107015978
NCBI-ProteinID:
XP_015071926
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Position
4:complement(72053259..72058966)
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AA seq
617 aa
AA seq
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MDNGILKVTISVPDGIVTGIRYNGVDNLLEARNPEENRGYWDVVSSSTGSTSKFERLKCT
TYKVILKTKDQIELSFSRKWDVSLQNKLIPLNIDKRFIMLKGCSGFYSYATYEHLEGWPD
FHLDETRIAFKLRKDKFHYMAMADNWRRYMPLPDDRLPPRGQQLAYPEAVLLVDPIEPEF
KGEVDDKYQYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQSLTSHVGPTNLA
TFLSPHYAGADLIPKFAQGEAWKKVFGPVFLYVNSVKKDEDPVALWDDAKIQMHHEVQSW
PYSFPASKDFPSANQRGSVSGILLVQDKYTSDGCIPANGAYVGLARPGEVGSWQRECKGY
QFWAKSDNNGYFSINNIRWGDYNLYAWVPGFIGDYVYGTPISITSGCKINVHEIVYQPPR
DGPTLWEIGIPDRTAAEYFVPEPNPKFINNVFINHPDRFRQYGLWDRYSELYPTDDLVYV
IGKSDYRKDWFFAQVTRRKEDGTYQGTTWQIRFKLDSVHQGGTYKLRIAIATATLAEVQV
RVNNPSTNRPLFTTGLFGRDNSIARHGIHGLYWLYNIDIQGNLLVQGDNTIYLGQPRHQS
PFQGIMYDYIRLEAPPN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggataatggcattctcaaagtgactatatcagtaccagatggaattgtaactggaatc
agatacaatggcgtcgacaatttgctcgaggctcgaaatcctgaagaaaacagaggatac
tgggacgttgtctcgagctcgacaggaagtacttcaaaatttgaaaggctcaaatgcaca
acctataaggtcattttgaaaacaaaggatcaaatagagttgtcgttctcaaggaaatgg
gatgtgtcgcttcagaacaaacttattcccctgaacatagacaaaaggtttataatgctt
aaaggttgctcaggattctattcttatgcaacttatgaacatttagaaggatggcctgat
ttccaccttgacgagactaggattgcgttcaagctcagaaaagacaagtttcattatatg
gccatggcagataactggcggagatatatgcctttacctgatgacaggttaccacctaga
ggacaacaacttgcttatccagaagcagtcctacttgttgatcccatcgagcctgagttc
aaaggcgaggtcgatgataaataccagtactcgtgtgataataaagacaacaaggtccac
ggctggatatctatggacccacctgtgggattctggcaaattacaccgagtgatgaattt
cgatcgggtggacctgtcaaacagagccttacatcccatgtcggtccaactaatctagct
acatttctaagccctcattacgctggagctgatctaataccaaagtttgcacaaggtgaa
gcctggaagaaagtgtttggccccgtgtttttatatgttaattctgttaagaaagacgaa
gatcctgttgctctatgggatgatgccaagatacagatgcaccatgaagttcaaagttgg
ccttacagttttccagcctcaaaagattttccgtcagcaaatcaaaggggcagtgttagt
ggtatacttttggtgcaagacaagtacacgagtgatggttgtatacctgcaaatggtgca
tatgttgggcttgctcgaccaggagaagttggttcctggcaaagagaatgcaagggctac
caattttgggctaaatcagacaacaatggatacttctctataaacaatatacgttggggt
gactacaatctttatgcatgggtccctggattcattggggactatgtatatgggactccc
atttccataacttcaggttgtaaaattaatgtgcacgaaatcgtatatcagcctccaaga
gatggacctacattatgggaaataggcattcctgatcgtactgctgcagaatattttgtt
cctgaacccaacccgaaatttatcaacaacgttttcatcaatcatcctgacaggtttagg
caatatggattgtgggataggtactccgagttatatccaacggatgaccttgtgtatgta
attggtaaaagtgactatagaaaagactggttttttgctcaggtcacaaggagaaaagag
gatggcacatatcaaggaacgacatggcaaatcagatttaaacttgattcagtccatcaa
ggaggaacatataaattgcgcattgcaattgcaactgcaactttagctgaagtgcaggtt
cgggtgaataatccgagcacaaaccggcctctatttacaacaggattgtttggaagagac
aactcaattgctaggcatggaattcatggattatattggctgtacaatatagacatacag
ggaaatctgctagtgcaaggggacaacaccatttacttaggccaaccaagacatcaaagt
cctttccaagggattatgtatgactatattcgtctcgaagctccaccaaactaa
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