Solanum pennellii: 107016019
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Entry
107016019 CDS
T04130
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
spen
Solanum pennellii
Pathway
spen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107016019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107016019
03019 Messenger RNA biogenesis [BR:
spen03019
]
107016019
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107016019
RNA polymerase I system
107016019
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
107016019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
107016019
NCBI-ProteinID:
XP_015071981
UniProt:
A0ABM1GJN5
LinkDB
All DBs
Position
4:complement(2620098..2624440)
Genome browser
AA seq
116 aa
AA seq
DB search
MGSQPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFT
GVISVMDPTRSWAARWLRIARYVPGCYTLAVSEALPEDLQNLCEDEHIPYAPPKRI
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccaacctgcacaaattccgaccagttttgggcatgaactgagagcttgtctc
cgttgccgtcttgttaaaacttatgaccagtttagggaatcaggatgcgagaactgtccc
ttcttcaagatggatgaagatcatgagcgtgtagtggactgcactactccaaattttact
ggtgtaatctctgttatggatccaacgaggagttgggcagctcgatggcttcgaattgca
cggtatgtccctggttgttacacacttgctgtatctgaggcacttccagaagatttgcag
aatctttgtgaggatgaacatatcccgtatgctcctccaaaacgcatctga
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