Solanum pennellii: 107016024
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Entry
107016024 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107016024
04121 Ubiquitin system [BR:
spen04121
]
107016024
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107016024
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107016024
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107016024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Prok-RING_1
zf-RING_16
zf-RING_Vps41
zf-Nse
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-HC5HC2H
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107016024
NCBI-ProteinID:
XP_015071984
LinkDB
All DBs
Position
4:2850484..2855527
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AA seq
309 aa
AA seq
DB search
MSSAGITVADGGAALYFCYKCSNTVTITPSPTGDLFCPTCNSDFVEEYEEPDPEPEMFPN
FPNPGLLSSLLMGARPRSAPTTGSHQHSAPATGSRVSPYTAFFNSNRNPRQMSTGSDDFN
PFEFLQTHLAALRANGASFEFVIEGGNGGSGLQMPANYGDYFVGPGFEQLIQNLAENDPN
RYGTPPASRAAVEGLPTIKVDEELMRSELAQCAVCKDDFEMGSDVIQMPCKHVYHKDCII
PWLELHSSCPVCRYELPTDEPENENRQRDNDGDSSGDGSASGSGGSGRRFTTISLPWPLG
SFGASSSQG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccggaatcaccgtcgccgacggcggcgcagcgctgtatttctgctacaaa
tgcagtaacaccgtcaccattaccccttctcctaccggcgatctcttctgccctacttgc
aacagtgatttcgtcgaggaatacgaggagccggaccctgaaccggaaatgtttccgaac
ttccccaacccgggcttgttgagtagtttactcatgggtgctcgtccgcgttctgctcct
accaccggttctcatcagcattctgctcctgccaccggttctcgtgtttccccatacact
gcttttttcaactcaaaccgaaaccctaggcaaatgtccaccgggtctgatgatttcaat
ccatttgagtttcttcagactcatctggctgctctaagagctaatggggctagtttcgag
ttcgttatcgaggggggtaacgggggtagtggtctccaaatgccggcgaattatggggac
tatttcgttggacccgggtttgagcaattgatccagaatttggcagaaaatgatccaaac
cgatatgggactcctccggcgtcgagagcagcggtggaggggctccctaccatcaaagtt
gatgaggaattgatgcgttctgaactggcacagtgtgctgtttgtaaggatgattttgag
atggggtcagatgtgatacagatgccttgtaagcatgtttatcataaggattgtatcata
ccgtggcttgagttgcacagttcttgcccggtttgtcgctatgagttgccaacggatgag
cctgagaatgagaataggcaaagagacaatgatggggactcgagcggggatggttctgct
tctggaagtggggggtcagggagaaggtttactacaatatcattgccatggcctttggga
agttttggagcatcatctagccagggatga
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