Solanum pennellii: 107016382
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Entry
107016382 CDS
T04130
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Module
spen_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107016382
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107016382
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107016382
NCBI-ProteinID:
XP_015072352
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All DBs
Position
4:5941661..5949984
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AA seq
476 aa
AA seq
DB search
MTLLRNPFILFTIFIIIIMSFSSCYSIKFLDDDHNINNLEGEFGNDFHFKAYPSNYFNTI
LDHEKNNNIKKNLEIISRFQRYNNMEKLNEEEDQAKVTTINVDSFGAKGDGSIDDTNAFQ
KAWKEACSSSHVVSFVVSQNKKYLLKPIKFYGPCKSSITMQIYGTLLASDDTSDYKKDSR
HWLIFDSVQKLVVGGAGVINGNGKIWWQHSCKINKKLPCKVAPTALTFYKCNNLKVKDLK
IENAQQIHLLIEKCVGVEVTKLVVTSPENSPNTDGIHITNTQNIQISDSTIGTGDDCISI
VDGSQKVLATGITCGPGHGISIGSLGGGNSEAHVSDIHVNGAKLFGTTNGLRIKTWPGGF
GSASNIKYQNVVMNNVKNPIIIDQNYCDQADGPCKAETDSAIEVKNVIYQNIKGTSATND
AINIKCSKKFPCEGILMENVKLLGGNGETPNAIWGNINNLTCKNVLPECQKNSKIV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacacttctaagaaatccctttattttattcactatttttatcattattattatgtca
ttttcatcttgctatagcattaaattccttgatgatgatcacaatataaataatcttgaa
ggggaatttggtaatgattttcattttaaagcttatccttcaaattatttcaacaccatt
cttgatcatgaaaaaaacaacaatataaagaaaaatcttgaaataattagtaggttccaa
agatataataatatggagaaattaaatgaagaagaagatcaagctaaggttacaacaatt
aatgtggatagctttggagctaaaggtgatggaagtatagatgatacaaatgcatttcaa
aaagcatggaaagaagcttgttcatcttcacatgttgtgagttttgtggtgtcccaaaac
aagaaatatcttctcaaaccaatcaaattttatgggccatgcaaatcttccattacaatg
cagatttatggaaccctattagcatctgatgatacttcagattacaagaaggatagtagg
cactggcttatttttgatagtgttcaaaaattggttgttggaggagctggagttatcaat
ggcaatggcaaaatttggtggcaacattcttgcaaaattaataaaaaattgccatgcaag
gtagcacccacggctctaacattttacaagtgcaacaacttgaaagtgaaggaccttaaa
atagaaaatgcacaacaaatacatttgctaattgagaagtgtgttggtgttgaagttaca
aaattggtagtgacttctccagaaaatagccctaatactgatggaatccatataactaac
actcaaaatattcaaatttctgattccaccattggcacaggtgatgattgcatctcaatt
gtggatggatctcagaaggtcttagccactggcattacttgtggaccaggtcatggaatt
agtattggaagtttgggaggtggaaattcagaagctcatgtgtctgatattcatgtaaat
ggagctaagctttttggaactacaaatggacttaggattaagacttggccgggaggattt
ggaagtgcaagcaatattaagtatcaaaatgtggttatgaataatgtcaaaaatccaata
attatagaccaaaattattgtgatcaagctgatggtccatgcaaagctgagaccgactca
gcaattgaagtgaaaaatgtgatttatcaaaatatcaaaggcacaagtgcaacaaatgat
gcaataaatatcaagtgcagcaaaaaatttccatgtgaaggaattttgatggagaatgtg
aaattgttaggaggaaatggtgaaactccaaatgctatttggggaaatattaataatctt
acatgcaaaaatgttttaccagaatgtcaaaaaaactcaaaaattgtataa
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