Solanum pennellii: 107016450
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Entry
107016450 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107016450
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107016450
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107016450
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
107016450
NCBI-ProteinID:
XP_027772542
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Position
4:complement(4886435..4891435)
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AA seq
687 aa
AA seq
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MMGKLKGILFWLTIIVQLFSIVTSRTMHHARHTRLKHRHHDQMMHPPPITHRHVDMMHPP
PVTLHISNRYVVIDNGIVQLTLTNPTGHISGISYNGIDNLLEKRNQEVRRGYWDVMWKLP
KDQGGTFDTFFMKNFKVISQDDDKVEVSFTKTWNSNADHDLPLNIDKRFVMLRGNSGFYS
YGKFEHSEGMPALRVDEARIAIKLSQNLFHYMAVSDDRQRVMPTNQDISHGKALAYKEAT
QITHPSNSPFNYEVDDKYQFSSDNKDIKVHGWICNNPHVGFWVITPTNEYTCGGPMKQDL
TSHSGPTSLATFFSGHYTGPQLGLDLQDGESWKKVFGPVFFYLNSDSGNNHQTLWEDAKR
QMFEETKKWPYDFPQSKEYLKANERGTVSGRLLVNDRYISEDPFYAKSAYVGLALPGDVG
SWQTETKGYQFWTQTDESGYFKINGVIPGSYNLYSWVPGVIGDYKYNLNFTITQGSDINL
GDLVYNPPRNGPTLWEIGIPDRTAAEFFVPDPLPSLTNHVFINSTTHRFRQYGLWDRYTD
LYPNEDLVYRVGVSDYTKDWFYAHVTRRTVHKQYIPTTWQILFDLSTVDPSGTYTLHIAL
ASATSSHLLGRINNPTKPRPIFQTPGLGKSNAIARHGIHGLYSLFTFEIPGNNLQIGENI
IYLTQAKGGTPFNGVMYDYIRLEGPSQ
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaaagttgaaaggaattttattttggcttacaatcatagttcaacttttctcg
attgttacttcgagaacgatgcatcatgcaagacatacacgattaaaacataggcatcat
gatcagatgatgcatcctcctccaatcacacatagacatgttgatatgatgcatcctcct
ccagtcacattgcacatctcaaatcgatacgtggtgatagataatggcattgttcaactt
accctaacaaatccaactggacatatttctgggataagttataatggaattgataatcta
ttggaaaaaaggaatcaagaagtaaggagaggatattgggatgttatgtggaaacttcca
aaagaccagggtggcacttttgatacgttttttatgaaaaatttcaaagttatatcacaa
gatgatgataaagttgaagtttcttttacaaaaacgtggaattccaatgcagatcatgat
cttcctctaaacattgacaaaaggtttgtgatgctaagaggaaattcaggattttattca
tatggaaaatttgaacattcagagggaatgcctgcacttagagtagatgaagcaagaatt
gcaatcaagctcagtcaaaacttgtttcactatatggctgtatcagatgataggcaaagg
gtaatgccaacaaatcaagatatatcccatggaaaagcccttgcctataaagaagctaca
caaataacacatccatccaactctccatttaactatgaggttgatgacaagtaccaattt
tcttctgataacaaagatattaaagtacatggatggatttgtaataatccacatgtaggt
ttttgggtgattacaccaactaatgaatatacatgtggtggaccaatgaaacaagatctt
acttctcattctggtcccacctctctagccacattctttagtggccattatacaggtcca
caattaggattagatctccaagatggagaatcatggaaaaaagtatttggtcctgttttc
ttttatctcaattcagattctggtaataaccatcaaaccctttgggaggatgctaaaaga
cagatgtttgaagaaactaaaaaatggccatatgattttccacaatcaaaagaatatctc
aaagccaatgaacggggcacagttagcggtcgattattggtcaatgacaggtacataagt
gaagatcctttttatgcaaaatcagcatatgttggattggccctgcctggagatgttgga
tcatggcaaactgaaaccaagggttatcaattttggactcaaacagatgagtctgggtat
ttcaagattaatggagttatacccggaagttataacttgtactcatgggtccctggagtt
attggagattacaaatacaacctcaactttaccataactcaaggaagtgacatcaatcta
ggtgacttagtttataatcctccaagaaatggtccaactttatgggaaattggaattcct
gatagaactgcagctgaattttttgtgcctgatccattgcctagcctcaccaatcatgta
ttcatcaacagtactacacataggtttagacaatatggtttatgggatcgttatacagat
ttatatcctaacgaagatttagtatacagagttggtgttagtgattacacaaaagattgg
ttctatgcccatgtaaccaggaggactgtacataaacaatatataccaacaacatggcaa
attttatttgatctttcaactgtggatccaagtggaacttatacactccatatagcatta
gcttcagccacttcttctcatttgctaggaagaataaacaaccctaccaaaccaaggcca
atttttcagaccccaggacttggaaaaagtaatgcaatagcaagacatggaattcatgga
ctatactcacttttcacttttgaaattcctggaaataatttacaaatcggagaaaatatc
atatatttaactcaagctaaaggtggtactccttttaatggagtaatgtatgattatatt
agactcgaaggaccttcgcagtaa
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