Solanum pennellii: 107016564
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Entry
107016564 CDS
T04130
Name
(RefSeq) LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 2
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Pathway
spen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107016564
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107016564
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107016564
04121 Ubiquitin system [BR:
spen04121
]
107016564
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107016564
Peptidases and inhibitors [BR:
spen01002
]
Metallo peptidases
Family M67
107016564
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Others
Others
107016564
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
107016564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
Prok-JAB
DF298_N
Motif
Other DBs
NCBI-GeneID:
107016564
NCBI-ProteinID:
XP_015072483
UniProt:
A0ABM1GKT7
LinkDB
All DBs
Position
4:complement(19813499..19842529)
Genome browser
AA seq
166 aa
AA seq
DB search
MENFLEIASDNTKKDRETCGVLGAIIKDDTFYTTSLIIPKQESTSNSCQALQEEKIFAIL
NGQSLFPIGWIHTHPSQSCFMSSIDLHTQYSYQAMIPEAIGIVMAPTDTSRACEIFRLSD
GGKKILKDCPEKGFHPHKEPVDRSPLYXDCSNGYINSCLRLEIFYL
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttctggaaatcgccagcgacaacactaagaaggatagagagacttgtgga
gttcttggtgccatcattaaagatgacacgttttatactacctctctaataataccaaaa
caagaatcaacctccaattcttgtcaagccctacaagaggagaaaatatttgccatacta
aatggacaatccctctttccaatcggatggattcatacacatccatctcagagctgtttc
atgtcatcgattgatttgcacactcaatattcgtatcaggcaatgatacctgaggctatt
ggaattgtcatggctcctaccgatacatcaagggcatgcgaaatatttcggctatctgat
ggtggaaagaaaatcctcaaggactgcccagagaaaggatttcatcctcataaagaacca
gttgatcggagtcccctctatngggattgctccaatggctatattaattcatgtctaaga
ctagagatattttatttgtga
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