Solanum pennellii: 107016931
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Entry
107016931 CDS
T04130
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
spen
Solanum pennellii
Pathway
spen04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107016931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107016931
Membrane trafficking [BR:
spen04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
107016931
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
Use1
FlxA
LYRM_2
EF-G-binding_N
GCP_C_terminal
OmpH
MCPsignal
ZSWIM1-3_C
EFL1
Motif
Other DBs
NCBI-GeneID:
107016931
NCBI-ProteinID:
XP_015072746
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Position
1:100708409..100713420
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AA seq
324 aa
AA seq
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MASRNRTLVFRKYRDALRSVRIPAGSSPSTSSGHGSGPVIELATTSLLNPNRSYAPLSTE
DPGTSSNGPVTVGLPPAWVDLSDEITANVQRVRTKMSELAKAHAKALMPSFGDGKEDQRR
IEALTHEITDLLKRSEKKLQRLSAAGPSEDSNVRKNVQRSLATDLQSLSMELRRKQSTYL
KRLQQQKEGPDGVDLEMNLNGSHSRRDDDDLDDLGFNEHQMAKLKKSEAFTVEREREIQQ
VVESVNDLAQIMKDLSVLVIDQGTIVDRIDHNIQNVASTVEDGLKQLKKAERSQKRGGMV
MCATVLVIMCFIMLVLLILKEIIF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagaaatagaacgcttgtgtttagaaagtatagagatgcgttgagaagtgtt
cggatcccggcgggctcttcgccgtccacgtcatccggacatggtagtgggccggtgatc
gaattggcaacgacttctttgcttaatcctaatcgatcttatgctcctctcagtacggaa
gaccccggaacctccagtaatggaccagttacagtaggtctaccgccagcttgggtggat
ttgtcagatgaaatcacggctaatgttcaacgggtccggacaaagatgtctgaactagcc
aaagctcatgctaaggctttaatgccatcatttggagatggtaaggaagatcaacgtcgt
attgaggctcttacccatgaaataactgatcttctcaaaagatcagaaaagaaattacaa
aggctttctgcagctgggccttccgaggattcaaatgttaggaaaaatgtacagcgctct
cttgctacagatcttcaaagcctatcaatggaacttcgcagaaaacagtctacttatttg
aagcggcttcagcagcagaaagagggtccagatggagttgacttggagatgaacttaaat
gggagccattctagaagggatgacgatgatttggatgacttgggatttaatgagcatcag
atggccaagctaaagaaaagtgaggcattcactgttgaaagagagagagaaatacagcag
gtggttgaatcagtgaacgaccttgcccaaattatgaaagatctatcagttctggtgata
gaccagggtactatcgtcgataggatagaccacaatattcaaaatgttgcatcaacagtt
gaggacggccttaaacaactaaagaaggctgaacgaagtcagaagcgaggtggaatggtc
atgtgtgcaacagttctagttatcatgtgctttataatgctagtcctcttaattttgaag
gagataatattctga
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