Solanum pennellii: 107017620 Help Entry 107017620         CDS       T04130                                  Name (RefSeq) coatomer subunit alpha-1   KO K05236   coatomer subunit alpha Organism spen  Solanum pennellii Brite KEGG Orthology (KO) [BR:spen00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:spen04131]     107017620   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:spen04147]     107017620 Membrane trafficking [BR:spen04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     107017620 Exosome [BR:spen04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    107017620   Exosomal proteins of bladder cancer cells    107017620 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 TPR_COPA_B EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Motif Other DBs NCBI-GeneID:  107017620 NCBI-ProteinID:  XP_015073288 LinkDB All DBs Position 4:complement(75649285..75654867) Genome browser AA seq 1218 aa AA seqDB search MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW NWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE VDTLRGHMNNVSCVLFHSRQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAAHP EMNLLAAGHDSGMIVFKLERERPAFSVSGDSLFYVKDRFLRVYEYSTQKENQLIPIRRPG SNSLNQGPRTLSYSPTENAILICSDVDGGSYELYIIPKDTYGRGDAVQDAKRGTGGSAVF VARNRFAVLEKSTNQVLVKNLKNEIVKKSPLPTATDAIFYAGTGNLLCRAEDRVVIFDLQ QRIVLGELQTPFIRYVVWSSDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDDN GVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYISKIYGNTIFCLDRDGKNRPIIIDSTEYI FKLALLRKRYDQVMSMIRNSELCGQAMIAYLQQKGFPEVALHFVKDELTRFNLALESGNI EIALESAKKLDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNLDKLSK MMKIAEVKNEVMGQFHDALYLGNVRERVKILEEAGHLPLAYITANVHGLKDTAERLAEKL GDNVPSLPKEKKASLLQPPTPILGGGDWPLLMVTKGIFEGGLDATVRGGHEEYEEAADAD WGESLDIGEVENLQNGDISMVLDDEEGKEENDEEGGWDLEDLDLPPDTDTPKTASNARSS VFVTPNPGMPVSQIWVQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFSPLKQLFADLHMG SHTYLRAFSSAPVISLAIERGWSESASPNVRGPPALIFNFSQLEEKLKTAYRATTSGKFS DALRLFLSILHTIPLIVVESRREVDEVKELIVIVKEYVLGLQMEVKRKESKDNPVRQQEL AAYFTHCNLQLPHLRLALQNAMSICYKASNLSSAANFARRLLETNPTNESQAKTARQVLQ AAEKNMRDATELNYDFRNPFVVCGATYVPIYRGQKDVTCPYCTTHFVPSQQGQLCTVCDL AVVGADASGLLCSPSQVR NT seq 3657 nt NT seq  +upstreamnt  +downstreamnt atgttgacgaagtttgaaacgaagagtaatcgagtgaaagggctcagttttcatagcaaa aggccatggatcttagctagtcttcatagcggtgtgatccagctttgggattaccgtatg ggaactcttattgatcgatttgatgaacatgatggccctgttcgtggcgttcattttcac aagtctcagcctctttttgtatcaggaggagatgactataagataaaggtctggaattat aagctgcatcggtgcttgtttacgctgcttggacatcttgattatattcgcactgtccaa tttcatcatgagtatccctggattgtcagtgcaagtgatgatcagacaatcaggatatgg aactggcagtctcgcacttgtatttctgtcttgactggacacaaccattacgtgatgtgt gccctatttcatcccaaagaggacttggttgtctctgcatctttggatcaaactgttcgg gtctgggatattggtgctctaaggaagaaaactgtttctcctgctgatgacatcttgcgc ttgagccagatgaatacagacttctttggtggagtagatgctgttgtgaagtatgtcttg gagggtcatgatcgaggagttaactgggcttcatttcaccctacattgcccctaattgtg tctggcgcggatgatcgccaggtgaaaatctggcggatgaatgatacaaaggcctgggag gtggacacattgagaggccatatgaacaatgtatcttgtgttttgttccattcaaggcaa gatattattgtttccaattcagaggataagagcattcgagtgtgggatgctacaaaaagg actggtctccagactttccgcagggagcatgacagattttggatccttgcagctcatcct gagatgaatcttctagcagctggtcatgacagtgggatgatagtgttcaagttggagaga gaacgccctgctttttctgtgagcggtgattctttgttttatgtgaaggatcgatttctc cgtgtgtacgagtattcaactcagaaggagaatcagttgataccaattagaaggcctggt tcaaatagtctgaaccaaggtccacgaacgctttcctacagtcctactgagaatgctatt ttgatctgttcggacgttgatgggggctcctatgaactatacattatacctaaagacact tatggtaggggtgatgctgttcaagatgccaaaaggggaactggaggatcagcagttttt gttgctcggaacaggtttgcagtgcttgagaaaagcaccaaccaagtcctggtcaagaat ctgaagaatgaaattgttaagaaaagccctctgcctactgctactgatgcaatattctat gctggcacaggaaacttactgtgcagggcagaggacagagttgttatctttgatctgcag cagagaattgttcttggagagctgcagactcctttcatcaggtatgtcgtttggtcgtcc gacatggaaagtgttgctttgcttagcaagcattccattgtaatagcggataagaagctt gtgcaccgttgtactcttcacgagacaattcgtgtcaagagtggtgcctgggatgataac ggggtcttcatttataccacacttacccacatcaagtactgtcttcccaatggcgatagt ggaatcatcaaaaccttagatgttccagtctacatttctaagatatatgggaacactatt ttttgcttggatcgagatgggaagaaccgtcctattattattgattcaactgaatatatt ttcaagctggccctgcttagaaagagatatgaccaggttatgagtatgataagaaactcc gagctttgtggtcaagccatgattgcctatttgcagcagaagggttttcctgaggttgct cttcattttgtcaaggatgagcttactcgtttcaacttagcacttgaaagtgggaacatt gagatagctcttgaatctgctaagaagcttgatgagaaggatcattggtataggcttggg gtggaggcccttcgacagggtaatgcaggtattgttgaatatgcctaccagaagacgaag aactttgagaggctctctttcctttatctaataacaggaaacctggataagttgtcaaaa atgatgaaaattgctgaggtaaaaaatgaagttatgggtcaattccacgatgccttgtac cttggtaatgttcgtgagcgtgtcaagattttggaggaggctggtcatcttccccttgca tacatcacagcgaatgttcatgggctgaaggatactgctgagcgtcttgctgaaaaactg ggtgataatgttccttcattgccaaaggagaagaaagcatctctcttgcagcccccaact cccattttgggtgggggagactggcctctactgatggtcacaaaaggtatatttgaaggt ggtttggatgctacagtcaggggcggacatgaggagtacgaagaggctgcagatgctgat tggggtgagtcactggatattggtgaggtggaaaatctgcagaatggggatatcagtatg gtgctggatgatgaagaaggaaaagaagaaaatgatgaggaaggaggatgggatcttgag gatttggatctgccacctgatactgacacaccaaagactgcttccaatgcccgctcttct gtttttgttaccccaaaccctggcatgcctgtcagccagatttgggtccaaaaatcatct cttgctgcagaacatgcagctgctggcaatttcgatactgctatgcgtttgctgagccga caactagggattaagaacttctctcctttaaagcaattgtttgctgatcttcatatggga agccatacatatctccgtgccttctcctcggcaccagttatctctctggcaattgagaga ggttggagtgagtcagctagtcccaatgtgcggggtccacctgccctcatcttcaatttc agtcagctcgaagaaaaacttaaaactgcctacagagccactacttctgggaaattttct gatgctcttagattattcctgagcattcttcacaccattcctttaattgtggttgagtca cgacgagaggtggatgaggtcaaggaattgattgtcatagtgaaggagtacgttttaggt ttgcagatggaggttaagaggaaggaatcaaaagataaccccgttcgtcagcaggagttg gctgcctacttcacacactgtaatctgcagcttccacacctgaggctcgcattacagaat gctatgtctatctgctataaggcaagcaatctcagctcagcagccaactttgctaggaga ctgttggagacaaatccaaccaatgaaagccaagcgaaaacagcccgccaggttcttcaa gcagctgagaaaaatatgagagatgctacagagttgaattatgacttcagaaatccgttt gtggtctgtggcgcaacatatgtccctatttacagagggcagaaggatgtcacttgccct tattgtactactcattttgttccgtcccagcaaggacagctttgtactgtttgtgatctt gcagttgtaggagcagatgcctctggcttgctttgctcaccttcacaggtcagataa

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