KEGG   Solanum pennellii: 107017708
Entry
107017708         CDS       T04130                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107017708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107017708
   03400 DNA repair and recombination proteins [BR:spen03400]
    107017708
Spliceosome [BR:spen03041]
 Complex B
  Other components
   Prp19 complex
    107017708
 Complex C
   Prp19-CDC5 complex
    107017708
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107017708
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 107017708
NCBI-ProteinID: XP_015073427
LinkDB
Position
4:3448800..3454315
AA seq 1002 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDENYDPNDDPR
KLKPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDVRQRKRKRRGIDYNAEIPFEKKPPPGFYDVTEEDRPVDQPKFPT
TIEELEGERRVDKEARLRKQDIARNKIAERQDAPTSILHANKLNDPEAVRKRSKLNLPAP
QIPDHELEAIAKIGIASDLIGGDELSEGNAATRALLANYAQTPQHAMTPMRTPQRTPSTK
QDAIMMEAENQRRLTQSQTPLLGGDNPLLHPSDFSGVTPKKREVQTPNPLLTPSATPGAT
SLTPRIGMTPSRDSYGMTPKGTPMRDELRINEEMDMHSNAKLGQFNSKKELLSGLKSLPQ
PKNEYQIVIQQPPEENEEPEEKIEEDMSDRIAREKAEEEAKRQALLRKRSKVLQRELPRP
PIGSLELIKSSLMRADEDKSSFVPPTLIEQADEMIRKELVSLLEHDNTKYPLDEKPEKEK
KKGVKRKIVAEPAIEDFEEDELKEANGLIKDEAHFLRVAMGHESESLDEFVEIHKATLND
IMYFPTRNAYGLSSVAGNVEKLAALQNEFENVKKKMDDDTKKATKLEQKIKVLTNGYQMR
AGKLWSQIESTFKKMDTAGTELECFRALQKQEQLAASHRINNMWEEVQKQKELERTLQKR
YGDLIADTQKIQHLMDEYRIQDQLQEEVAANNRALELAKAEMAEKESVPSADDLEPSGTG
QNSNTEENSASASHVPIEADVHVEPSGTNQCSNAEENSASIEADNVHVEPSGTSQCPIAE
ETSASVSHDTTPQDVDGQVQVADVSTMDAEAISDHVPMEGQQNLVEESNTVVTKTEDSTV
AAGDADVTETEDSTVAAGDVDVTKTDDSGVVAGDGEADPKNM
NT seq 3009 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggaggagtatggaagaacacggaggatgagattctaaaggcg
gcggtgatgaagtatgggaagaatcagtgggctcgtatttcttctttacttgttcgtaaa
tctgctaagcagtgtaaagctcgctggtatgaatggctcgatccttcaattaagaagact
gaatggactagagaggaggatgagaaactacttcaccttgcaaaactcatgcctacccaa
tggaggacaattgcgccaatcgttggccgtacaccatcacaatgccttgaacgttatgag
aagcttctcgatgcagcatgtactaaggatgagaactatgatcctaatgatgatccgaga
aaattgaagcccggagagattgatcctaacccggaatcaaagcctgctcgtcctgatcct
gttgatatggatgaggacgagaaagaaatgctttctgaagcacgggctcggttggccaac
acaagaggcaagaaggctaaaaggaaagccagagaaaagcagcttgaagaggcgcggagg
cttgcttctttacagaagaggagagaactgaaggctgctggaatagatgtccgtcaaagg
aagagaaaaaggagaggtattgattacaatgctgaaattccctttgaaaagaagcctcct
ccaggtttctatgatgtcactgaggaagaccgtccagttgatcaacctaagtttccaact
accattgaggaactagaaggtgaaaggagagtcgataaggaagctcgcctaaggaagcag
gatattgcgaggaataaaattgcagagagacaggatgcccctacatccatattgcacgcg
aacaaacttaatgatccagaagcagtgaggaagaggtcgaaactgaatcttccagcacca
cagattccagatcatgaattggaggccatagcaaagataggtattgccagtgatctaatt
gggggcgatgaactgtccgaagggaatgctgcaacgcgtgctcttcttgcaaattatgcc
cagacaccacaacatgcaatgactcctatgcgaacacctcaaagaaccccttcaactaag
caagacgccattatgatggaagcagaaaatcaacgaagattgactcaatctcaaacacca
ttacttggaggagataatcctttgttgcacccctcagatttctcgggtgtcactcctaag
aaaagggaggttcaaactccaaacccacttttaactccttcagcgactcctggagccacg
agccttactcctagaattggcatgacaccttcgagagattcttatgggatgacacccaaa
ggaactcctatgagggacgagctacgcattaatgaagaaatggatatgcatagtaatgct
aaactggggcaatttaattcaaaaaaagaattgctttctggtttgaaaagccttcctcag
ccgaagaatgagtaccagattgtcatccaacaacctcctgaagaaaatgaagaaccagaa
gagaagatcgaagaagacatgtctgataggattgccagggagaaggctgaagaagaagca
aagcgacaagcattactccgtaaaaggtcaaaagtattgcaaagggagctccctagacct
cccattggttctctagaactaataaagagttccttgatgagagctgatgaggacaagagc
tcctttgttcctcctacactaattgagcaggctgatgaaatgattagaaaggaacttgtg
tccttgctagaacatgataataccaagtaccctctagatgagaagccagagaaggagaag
aaaaagggggtcaagcgaaaaattgttgctgaacctgctattgaggattttgaggaagat
gaattaaaagaggccaatggattgatcaaggatgaggctcactttcttcgtgtggcaatg
ggacatgagagtgaatctcttgatgaatttgtcgaaatacacaaagcaactttgaatgat
atcatgtactttcctacccgaaatgcttatggtctctctagtgttgctggaaacgtggaa
aagcttgctgctttgcagaacgagtttgagaatgtgaagaagaaaatggacgatgatact
aagaaagcaacaaaacttgagcaaaagatcaaagttcttactaatggatatcagatgcga
gctggaaagctttggtcacagatagagtcaaccttcaagaaaatggacacagcgggtaca
gagcttgaatgcttccgagcattacaaaaacaagagcagctagcagcatctcacaggatc
aacaatatgtgggaagaagttcagaagcaaaaggagcttgagcgtactttacagaaaagg
tacggtgacctcatagcagatacgcaaaagatccagcatctcatggatgagtatagaata
caagatcaattgcaggaagaagttgcagcaaataatcgtgctcttgagttggcgaaggca
gaaatggcagaaaaagagagtgtaccatctgctgatgatttggaaccttcaggtaccgga
cagaattccaatacagaggaaaattctgcttctgcctctcatgtaccaatagaagctgat
gtgcatgtagagccttcaggtaccaaccagtgctctaatgcagaggaaaattctgcctct
attgaagctgataatgtgcatgtggagccctcaggtactagccagtgccccattgcagag
gaaacttctgcctccgtctctcatgacacaactcctcaagacgttgatggacaggtgcaa
gtggctgacgtttccacaatggacgctgaagccataagtgaccatgtacctatggagggt
cagcaaaacctagtagaagagagtaacacagttgttactaaaacagaagactctacagta
gcagcaggtgacgcagatgttactgaaacagaagactctacagtagcagcaggtgacgtg
gatgttactaaaacagacgactctggagtagtagcaggtgatggtgaggctgatcccaaa
aacatgtaa

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