Solanum pennellii: 107017742
Help
Entry
107017742 CDS
T04130
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
spen
Solanum pennellii
Pathway
spen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107017742
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spen02000
]
107017742
Transporters [BR:
spen02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107017742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
107017742
NCBI-ProteinID:
XP_015073475
LinkDB
All DBs
Position
4:6587950..6614820
Genome browser
AA seq
1903 aa
AA seq
DB search
MEKKKEKEKEDMRNSRRQLKAMLRKNWLLKIRHPFVTCAEILLPTLVMLLLIAVRSKSDI
RIHPAQPYIRQGRGMFVEVGKSNTSPPFNQVLELLLAKEEYLAFAPNTAETRMLINVLSL
KFPVLRLVTKVYEDEEELETYLRSDLYAAYDQNKNHTNPKIKGAVVFHEQGPQLFDYSIR
LNHTWAFSGFPDIRTIMDTNGPFLNDLALGVNTIPILQYGLSGFLTLQQVIDSFIIYAAQ
ATMTNLQRLPSHSLDSDAQLKIPWTQYSPSDIRLAPFPTREYTDDEFQSIVKKVMGVLYL
LGFLYPISRLISYSVLEKELKIKEGLYMMGLKDEIFHLSWFITYAIQFALSSVLLTVCTM
STLFQYSDKTLVFVYFFTFGLSGIMLSFMISTFFTRAKTAVAVGTLTFLGAFFPYYTVND
ETVSVIVKVIASFLSPTAFALGSINFADYERAHVGLRWSNMWRESSGVCFLVSLLMMLLD
SLLYFAIGLYLDKVLHKENGFCYPLHSLIQKCFGRKRKTRNNSASTSEVIFTENYDEICS
TDFIKDVSRPTLESMSLEMKQQESDGRCIQIRNLRKVYATNRGNCCAVNSLQLTLYENQI
LALLGHNGAGKSSTIAMLVGLISPTSGDALVLGKNILTDMDEIRKSLGVCPQYDILFPEL
TVKEHLEIFADLKGVSEDSKEKAVTEMVDEVGLADKLNTVVKALSGGMKRKLSLGIALIG
NSKVIILDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGSL
KCCGSSIFLKHQYGVGYTLTLVKTAPGASVAADIVYRHVPSATCVSEVAAEVSFKLPLAS
SSSFESMFREIERCMRRSNSGFETTDCREVGNLGIESYGISVTTLEEVFLRVAGGDFDQA
ELLEEKADPNLCDSVDLKVCQTNAPKTFFPSKLCGNYFGVIWFMVTLIFSACNLIWTAVS
SVIRLVTMQCCCCCILSRSTFWKHSKALLIKRAKSAQRDQKTIVFQLLIPAFFLFLGLLF
LKLKPHPDQQPVFFTTSYFNPLLSGGGGGGPIPFDLTSPIAKEVANHVHGGWIQKYQETT
YRFPDSTKALNDAIEAAGSTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDNQSGDGSLGY
TVLYNSTCQHSAPTFINLMNSAILRLATQNENMTIHTRNHPLPQTASQHQQHHDLDAFSA
AVVITIAFSFIPASFAVAIVKEREVKAKHQQLISGVSILSYWASTYIWDFISFLFPSSFA
LVLFWIFGLDQFIGKDSLIPTILLFLEYGLAIASSTYCLTFFFSEHSMAQNVILLIQVFT
GLILMVLSFIMGYINSTTHLNSVLKNFFRLSPGFCFADGLASLALLRQGMKNGSRDNILD
WNVTGASLSYLAAEAIVYFLITLGLEFLPQQKRNLSRIHEWWKSLGKSRRANSFGFSEPL
LRSSSGNVASEPDEDIDVKAERDRVLSGSTDNAVIHLRNLRKVYPGGKSQVPKTAVHSLT
FSVQEGECFGFLGTNGAGKTTTLSMLSGEEYPSDGTAFIFGKDIRSDPKVARRHVGYCPQ
FDALLEFLTVQEHLELYARIKGVPEYDLEDVVMQKLLDFDLMKHANKPSFALSGGNKRKL
SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALC
TRIGIMVGGRLRCLGSSQHLKTRFGNHLELEVKPVEVSSMDLENLCLIIQEKLFDIRPHS
RSILNDIEVCIGGSNSVVSGDASAAEISLSKEMIMAVGQWFGNEERVRALVSATEDSCKI
FGDQLSEQLARDGGLPLPIFCEWWLAKEKFTKIHSFIQSSFPEATFQGCNGLSVKYQLPC
GEGLSLADVFGYIERNRNQLGIAEYNVSQSTLESIFNHLAASS
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagaaggagaaagaaaaagaagatatgaggaattcaagaagacagctcaaa
gctatgcttaggaagaattggcttctcaaaattagacacccttttgttacctgtgctgag
attttactcccaactctcgttatgctgctgttgattgctgtgaggagtaaatctgatatc
cgcatccatccagctcagccgtatattcgtcaagggagagggatgtttgtggaagttgga
aaaagtaacacttctcccccttttaaccaagttctggagttactattggccaaggaggag
tatttggcatttgcacctaatacagctgagacaaggatgctgatcaacgttttgtctcta
aaatttcccgtactgaggctagttaccaaagtttatgaagatgaagaagaacttgaaaca
tatctacgttcagatctttatgctgcgtatgaccagaataagaaccatacaaaccccaaa
atcaaaggagcagtagtatttcatgagcaaggtcctcagttatttgattatagcatacgc
ctaaaccatacatgggctttctcaggatttcctgatattagaaccataatggacacaaat
ggtccatttctgaatgatttggcattaggcgtcaacaccataccaattttgcaatatggt
ctcagtgggttcttaacactccaacaagtcatagactcattcataatatatgctgctcaa
gcaactatgacgaacttacaaaggttgcctagccactctcttgattcagatgcccagctc
aagataccatggactcagtatagtccttcagacataagacttgctccatttccaactcgt
gaatatactgatgacgaattccagtccattgtcaagaaagtcatgggagtgctgtacttg
ctggggtttctttatccgatttctcgtctaataagttattctgtcttagaaaaggagctc
aagataaaagagggcctatatatgatgggtttgaaggacgaaatattccatctctcttgg
tttataacatatgctattcagtttgctctttcttctgtgctacttacagtatgcaccatg
agtaccctgtttcaatacagtgataagaccttggtgttcgtgtacttctttacctttggc
ctcagtggaataatgctctcctttatgatttccacgttcttcacgagagcaaaaaccgcg
gtagctgtcgggacccttactttccttggggcattctttccctattatactgtcaacgac
gaaacagtctctgtgatagtgaaagtgattgcttctttcctttcacctacggcttttgca
ttaggatccatcaattttgctgactatgagcgtgctcatgttggactccggtggagtaac
atgtggcgggaatcttcaggagtgtgctttttggtctctctcctgatgatgttacttgac
agtctgttgtactttgcaattggtctgtatcttgacaaggtcctccacaaggagaatgga
ttttgttacccattgcattccttgattcagaagtgctttgggaggaagagaaaaaccaga
aataattctgcatccacctcagaagtcatattcactgagaactatgatgaaatatgtagt
actgattttataaaagatgtatccagaccaactttagaatcaatgagcttggagatgaag
cagcaagaatcggatggcagatgtattcagatcaggaacctacgaaaggtgtatgctaca
aacaggggaaactgttgtgctgttaattccttacaactgactttatacgagaatcagatt
ctggcgcttttaggacacaacggggctggtaaaagcagtacaatagccatgcttgttggt
ctcatttctcctacttcgggagatgctctggtattggggaagaacatcttaactgacatg
gatgaaatacggaagagtttgggagtctgtcctcagtatgatattcttttccctgaatta
acagtgaaggaacatttggaaatattcgctgatttaaagggtgtttctgaagattctaag
gaaaaggctgtgactgaaatggttgatgaggttggattggcagacaagcttaatactgtt
gttaaagctctttctggaggtatgaaaaggaagttgtcccttgggatagctcttataggg
aacagtaaggttattattctggatgaaccaacaagtggaatggatccatactctatgcgg
ttaacttggcagctgattaaaagaaaaaagaagggaagaattatattacttacaacacat
tccatggatgaagctgatgtgctaggagatcggattgctatcatggccaatggttctcta
aagtgctgtggaagttcaatcttcttgaaacatcagtatggggttggttacactcttact
ctggttaagactgcaccaggtgcctcagtggctgctgatatcgtttaccgccatgtacct
tctgcaacatgcgtgagcgaagttgcagcagaggtttccttcaagcttcccctagcatcc
tcatcctcctttgagagcatgtttcgggaaatagagcgctgcatgagaagatccaactct
ggatttgaaacaacagactgtagagaggtaggcaatcttggcattgagagttatggcata
tctgtcacaactcttgaggaagtgtttctgagggttgctggtggtgacttcgatcaagcg
gagctccttgaagagaaagctgatccaaatttatgtgattccgttgatttaaaagtgtgc
caaactaatgctccgaagacattcttcccttccaaattatgtggaaactattttggagtc
atttggtttatggtgactttaattttttcagcttgtaatctaatatggactgcagtttca
agtgtcattaggcttgtaacaatgcagtgctgttgctgttgtatactgtcaaggtctact
ttctggaaacactcgaaagccctacttattaagagagcgaaatcagcacaaagagatcag
aaaacaattgtattccagctgttaattcctgctttctttttatttcttggtctgctgttt
cttaagcttaagccacatcctgatcagcagccggtcttcttcacgacctcgtactttaat
cctttattgagtggtggtggtggaggtggtccaattccttttgacctcacctctcctata
gcaaaggaggttgccaaccatgtccatggaggctggatccaaaagtatcaagagacaaca
tacaggtttcctgattctaccaaggcattgaacgacgccatagaagcagcaggatcaact
ttgggccctgtcctactttcaatgagtgaatatctgatgtctagcttcaacgaatcttat
cagtcaaggtatggagcgatagtcatggataatcagagtggtgacgggagccttgggtac
actgttctatacaacagtacttgccagcattctgctcctacatttatcaatttgatgaat
tcagcaatactaaggctagctacacaaaatgagaatatgacaattcacactcgtaaccac
cctttgccgcagacggcaagccagcatcagcaacatcatgatctcgacgccttctctgct
gcagttgtaatcactatagccttttcttttattcctgcctcattcgcggtggcgattgtc
aaggaacgtgaagtgaaagctaagcatcaacagctaatcagtggggtgtccatactctca
tattgggcttccacatatatatgggatttcatcagcttcttatttccttcatcattcgcg
ttagttctcttttggatatttggtcttgatcaatttattggaaaggattctctcattcca
acaattctgttgtttcttgaatatggactagcaattgcttcatcaacatactgcctcaca
ttcttcttttccgagcacagcatggctcagaatgtcattcttctcattcaagttttcact
ggcctcattcttatggttctatcgtttataatgggatatataaattctacaacacactta
aattctgtgctcaagaatttctttagactgtcaccaggattttgcttcgctgatggatta
gcttcattggcgcttttaagacaagggatgaagaatggatctagagataacatacttgac
tggaatgtgactggtgcttccttatcatacttggctgctgaggccattgtgtatttcctt
ataactctggggcttgaattcctgcctcaacaaaaaagaaatctttccagaattcatgag
tggtggaaaagcttgggaaaatctaggcgcgctaattcctttgggttttcggaacctctt
ctgagatcatcctctgggaatgttgcttctgaacccgacgaggacatagatgttaaagct
gagagagacagggttttgtctggctcaactgataatgcagttatccacctccgtaatctt
cggaaggtctatcccggagggaagtcccaagttccaaaaactgctgtccattcactgact
ttctctgtccaagaaggagagtgttttgggttcttaggaactaacggagcaggaaagaca
acaacactgtcaatgctatctggagaagaataccctagtgatggaacggcattcattttt
ggtaaagatatacgttcagatcccaaggttgctcgtagacatgttggatattgtcctcag
tttgatgctttactagaatttctaactgtccaagaacatcttgagctctatgcaagaatt
aaaggagtaccagagtatgatctagaagatgttgttatgcaaaagttgctcgattttgac
ctgatgaagcatgcaaataaaccatcttttgccttgagcggaggaaacaagcgcaagtta
tcagttgcaatcgcaatgattggagatcctcctatcgtcattcttgatgagccatccaca
ggtatggatcctattgccaaacgtttcatgtgggaagttatatctcgtttgtcaactaga
cgaggaaagacagcagtaatcttaactactcacagcatgaatgaggctcaagctctgtgc
acaaggattgggataatggttggaggcaggttgaggtgtcttggtagttctcagcacttg
aaaactcgcttcggaaatcatcttgaactagaggttaaaccagttgaagtcagctctatg
gatctggaaaatctctgcttaataattcaagaaaagctattcgatattcgtcctcactct
aggagtatactaaatgacattgaagtttgcattggaggtagtaactctgtagtctcagga
gacgcatcggcggcagaaataagcttatcaaaggaaatgatcatggctgttggacagtgg
tttggcaatgaagaaagagtgagagcattagtatctgcaactgaagactcttgtaagatt
tttggtgaccagttgtcagagcagttggctcgtgatggtggacttccgttgccgatattc
tgtgagtggtggttggctaaggagaagttcaccaaaatccattcattcattcagtcttca
tttcctgaagccacatttcaaggttgcaatggattgagtgtcaagtatcagctcccttgt
ggagaaggtctatcactcgctgatgttttcgggtacatagagaggaacagaaaccagctc
gggatagcagagtacaacgtcagccaatcaacacttgaatcgatattcaatcatttagca
gcaagctcgtga
DBGET
integrated database retrieval system
