Solanum pennellii: 107017746
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Entry
107017746 CDS
T04130
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
spen
Solanum pennellii
Pathway
spen04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107017746
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spen01001
]
107017746
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107017746
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107017746
Protein kinases [BR:
spen01001
]
Serine/threonine kinases: Other
VPS15 family
107017746
Membrane trafficking [BR:
spen04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107017746
Autophagy
Autophagosome formation proteins
PI3K complex
107017746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
WD40
VPS15-like_hel
WD40_WDHD1_1st
WD40_CDC20-Fz
HEAT
WD40_Prp19
WDR55
EIF3I
PK_Tyr_Ser-Thr
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
Cohesin_HEAT
TCAD9
APH
Lipoprotein_15
Beta-prop_Vps41
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
107017746
NCBI-ProteinID:
XP_015073479
LinkDB
All DBs
Position
4:complement(4643051..4652337)
Genome browser
AA seq
1552 aa
AA seq
DB search
MGNKIAKTTQASAMEYYLHDLPSSYNLVLKEVVGRGRFLKSILCKHDEGLVLVKVYFKRG
DFIDLREYEHRLSKIRDIFTSLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LCLIEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEMHVSQDAPLKPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQHDPSQLLEKIPDSGIRKMILHMIQLNPESRYSAESYLQNYAGVVFP
SYFSPFLHNFYSLLNPLNSDARVLICQTSFNEILKQMMSDKPGDRNPLTVSPHSVPVSQT
RQVSDMNENLNLVKDSSSNREEIEKGSVHDRFDLLGNVNTLLRDVKQNNQCPVVKPVLQD
IANTAYSQKQRQCHIQSPGEQIPVSSISFKRIHHPFLKKITMEDLTVLMSDYDNQSDTFG
MPFLPLPEEVMSCEGMVLIASLLCSCIRNVKLPFMRRGAVLLLNSCSLYIDDEDRLQRVL
PHVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVR
ICYASNISKLALTAYGFLIHSISLSEAGVLNETNPSQNSSISTSGEPVRPQSLNSDTQLG
QLRKSVAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSNDFLLPILPAFLNDRDE
QLRAVFYGQIIYVCFFVGQRSVEEYLFPYIEQALTDTTEAVIVNALDCLAILCKSGFLRK
RFLLEMIDRSFHLLCYPSQWVRRSSVTFIAASSENLGAVDSYVFLVPVIRPFLRRQPASL
ASEKALLSCLKPSISKEMYYQLVENAKSSDMLERQRKIWYNSTPQSKQWETVDLLERSSS
ELDRMKYWPGRKRDFPGYKSASDLTKPIDFTDCDDNPTKVKSVGTLIQDPSSIMESGDRL
PSEKLQLSGFVSPQVSGMSSFIDKSADGIPLYYFKEDNKRPAGTGVAASDSSFPYTSFGF
GSSSLPWIDPVNKSFNLANSVPAPKLVSGSISIGNSSTLLRRVVHEVEDREADQTAYVSN
KFQDIGSGTSKMGSLTMEDNTAATDRTDLSSFARTSMITDSGWRPRGVLVAHLQEHRSAV
NDISISADHSFFVSASDDSTVKVWDSKKLEKDISFRSRLTYSLEGSRALCVTVLQGSAQV
VVGACDGTIHMFSVDYISRGLGNVVEKYSGIADVKKNEVGEGAVASLLNYCSDVGASKMI
LYSTQNCGLHLLDTRTNSHAWNTKVYPKEGYISSLVAGPCGNWFVSGSSRGVLTLWDLRF
CIPVNTWQYSLACPIERMSLFLPPPSTSLSVAARPLVYVAAGCNEVSLWNAENGSCHQVL
RVANNENEAENSDLPWALAKPSNKANPKQDLRRNNGSKYRVDELSDPPPRLSGIRALLPL
PGGDLLTGGTDLKIRRWDHCSPERSYCVCGPSIKGVVNDDFYETKSSFGVQIVQEAKRRP
LATRQTAKAILGAAAVDAAGCHRDCILSLASVKLNQRLLLSGSRDGAVKVWK
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcaaaaacgacacaagcgtcggcaatggagtattacctccacgac
ttgccgtcttcgtataatctggtgctgaaagaagttgtaggtagaggtcgctttttgaaa
tcaattctctgcaaacacgacgaaggacttgtgcttgtaaaagtctatttcaaaagaggg
gatttcattgatttacgcgaatatgagcatcgtctctccaaaattcgtgacatattcacc
tcccttgatcatccacatgtttggcctttccagttctggcttgaaacagataaagctgct
tatttgttgaggcaatacttctttaacaatcttcatgatcgtcttagtacccgacctttc
ctctgtcttattgagaagaaatggcttgctttccagttgctttatgcagtgaagcaaagt
catgagcatggagtgtgtcatggtgatatcaagtgtgagaatgtgctagtcacatcttgg
aactggctttatcttgcagactttgcgtcattcaaacccacttatattccacatgatgat
ccttctgatttctccttcttctttgataccggtggacgaagacgatgctatcttgcaccc
gagagattttatgagcatggaggtgagatgcacgtttcacaagatgctcctttgaagcca
tctatggacatctttgctgttgggtgtgttattgctgagcttttcctcgagggccagcca
ttatttgaattgtctcaactgcttgcttatcgcagaggacaacacgatcccagtcaactt
ctggagaagattccagattcaggaatccggaagatgattcttcatatgattcaattgaac
ccagagtcacgatattcagctgaaagctatctgcagaactatgcaggagttgtgttccca
agctacttctcaccattccttcataatttctattccttgttgaatccccttaattccgat
gcaagggttctgatatgccagacctcttttaatgagatccttaaacaaatgatgagtgat
aagcctggtgacaggaacccccttactgtgagtccacattcagttcctgtcagtcaaaca
cggcaagtgagtgatatgaacgaaaatctgaatttagtgaaggactcatcgagcaacaga
gaagagattgagaagggctcagttcatgatcgctttgatctgcttggcaacgtgaacact
ttgctcagggatgtgaaacaaaataatcagtgtcctgttgtgaaacctgtgctgcaggat
atagccaatacagcatattctcagaagcaaagacaatgtcacatccaatctccaggtgaa
caaatcccagtgagctccatttctttcaagagaattcaccatccctttttaaaaaagatc
accatggaagatttgactgtgttgatgtccgactatgataatcaatcggacacttttgga
atgcctttcttaccacttcctgaagaggtaatgagctgtgaaggaatggtgctgatagcc
tcattgttgtgttcctgcatacgtaatgtcaaattgccttttatgaggagaggtgctgta
ttgctgttgaactcttgttccttgtacattgatgatgaagatcgattgcagcgagtactt
ccacatgtgatagcaatgctgtcggatccagctgcaattgttcgttgtgctgccttagag
actttatgtgatattcttcctttggttagagattttcctccaagtgatgccaaaattttt
ccagagtatattctccctatgctttccatgcttcctgatgacccagaggagagtgttagg
atttgttatgcaagcaatatatcgaagcttgctctaacagcttatggttttctgattcac
tcaataagcttgagtgaggcaggtgttctgaatgaaacaaatccatcccagaattcatca
atatcgacctcaggggaaccagtacggccacagagtctaaacagtgatacacaacttggt
caattaaggaagtcagttgctgaggttattcaagaactcgtgatgggcccaaagcaaact
ccaaacatcaggagagcactattgcaagacattggtaacctttgttggttttttgggcag
agacaaagtaatgatttcctgttgcccattctccccgcttttctaaatgatagagatgag
cagctcagggcagtattttatgggcaaatcatatacgtttgtttttttgttggacaaaga
agtgttgaagaatatcttttcccatacattgagcaggcactgactgatacaactgaggct
gtaatcgtcaatgcactagattgcttggccattctctgcaaaagtggctttctgcgcaag
cggttcctacttgaaatgatagaccgttctttccacttgttgtgctaccctagccaatgg
gtaaggaggtcatctgtcacctttattgctgccagcagtgagaacttaggagcagttgat
tcttatgtttttcttgtccccgtaataaggcccttccttcgcaggcagccagcatctcta
gcttcagagaaagctcttctctcatgtctgaagccatcaatttcaaaagaaatgtactat
cagcttgtggagaatgcaaagagttcagatatgctggagagacaaagaaagatatggtac
aattcaacacctcagtcaaagcaatgggaaactgtagatttacttgagagaagtagcagt
gagttggatcgaatgaaatactggcctgggagaaaacgtgattttccgggttataaatct
gctagtgatttaactaaaccaattgattttactgactgtgatgataatccgaccaaggtg
aaatcagtgggaaccttaatacaagatccttcaagcataatggagagcggtgatcgcctc
ccctcagaaaaattgcagctatctggctttgtgtctccgcaagtcagtggtatgagcagc
tttattgataaatctgctgatggcattcctttgtactattttaaggaggataacaagaga
ccagctggcactggtgtagcagcctctgattcctcatttccatatacatcatttggattt
ggttcttcatccttgccttggattgatcctgtgaacaaatcatttaacttggctaattca
gttccagcacctaagcttgtgtcaggttcaataagcattggcaatagctccacactgttg
cgtagagttgtacatgaagtggaagacagggaagctgatcaaacagcatatgtgagtaac
aagtttcaggacattgggtctggtacatctaaaatgggttccctaacaatggaagacaac
acagccgcaacagatagaactgatttgtcatcttttgccagaacatccatgattacagat
tcaggatggaggcctcgtggggttttggttgctcatctccaagagcaccgttctgctgtt
aatgatatatccatttcagcagaccacagcttttttgttagtgcatctgacgattctact
gttaaggtttgggattcgaaaaagctagagaaggatatctcattcaggtcaaggttaact
tattctttagaaggaagccgagctttatgtgttacagtgcttcaaggttctgctcaagtt
gttgttggagcatgtgatggaacaatacatatgttctcggttgattatatctcccgagga
ctcggtaatgttgtcgagaagtactctggtattgctgatgtgaaaaagaatgaagtggga
gagggtgctgttgcaagccttttgaactactgttcagatgttggtgcctcaaaaatgatt
ttgtacagcactcagaattgtgggctccatctgttggacacaagaacaaattcacatgcc
tggaacaccaaagtttatcccaaagagggctatatatcatctctagttgcagggccttgt
ggaaattggtttgtatcaggttcctcaagaggtgtacttacactttgggatttgaggttt
tgcataccggtgaacacatggcaatattctcttgcctgcccaattgagagaatgtctctt
tttcttcctcctcctagtacatcattgtctgtagcagcaaggccccttgtttatgttgcc
gcaggttgtaatgaagtttctctctggaatgcagagaacgggagctgccaccaggttttg
agggtagcaaacaatgagaatgaggctgagaactccgacttaccttgggctttagcgaag
ccatcaaataaggctaatcctaaacaagatctaagaagaaataatggttcgaagtaccga
gttgatgaattgagtgatccgcctcctcgcctttctggaattcgtgcgttgcttccatta
cctggtggtgatttgttaacagggggtactgacttaaaaatacgtcgctgggaccattgc
agcccggaacgaagttattgcgtttgcggaccatctataaagggggttgttaatgatgac
ttttatgagacaaaatccagctttggcgtacaaatagtgcaggaggcgaagaggcgacct
ttggccaccagacagacagcaaaggcaatcctcggagctgctgccgttgatgcagctggg
tgtcaccgtgattgtattctctctttggcttctgtcaaattgaaccagagacttctgcta
tcaggtagcagagatggagctgttaaggtttggaagtaa
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integrated database retrieval system
