Solanum pennellii: 107017805
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Entry
107017805 CDS
T04130
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a isoform X1
KO
K14972
PAX-interacting protein 1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107017805
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
107017805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
Thiamine_BP
KIX
Motif
Other DBs
NCBI-GeneID:
107017805
NCBI-ProteinID:
XP_015073560
LinkDB
All DBs
Position
4:3096295..3108769
Genome browser
AA seq
1348 aa
AA seq
DB search
MDGNNWRAAQAQAQAQAQGGGEGGGAAAGAMESGDWRTQLMPDSRQRIVNKIMETLKRHL
PVSGQEGVQELKKIAVRFEEKIYSAATSQQDYLRKISLKMLTMETKSQTPMTNSVQPNPA
SSGQNALGPGSHSMQSQVNSQAQQLPVPMVGNQTQTRQPLLQQNLQNNMASTGLQNSASL
APSLPSVSNLTQGTMPNVVGQNSNLQTMQNMPNVGQNLVANAIGQGMPPNMVANSQRQMQ
GRQQQVVSQQQQQQSQTTQQYMYQQQLHQHQMMKQKFQPGSTSQSLMQSHMQQQQQQQPQ
EQQQQLPQQQQNLLQPTQTQPSQQAMMQPSSIQSTSLSNLQQSQQSTVQQSTQSVLHQRQ
QSVMRQQQAPMLHQQQSSMLQPPILPAQQHQQQQQQQQLIAQQTNVANLQQNQLMSQQNT
MPDVQQRLVGQQNNYMHQQNNFQNMHQQQLGSQSSIAGVQQQQLSGSQQPGNSGLTSNQH
PIHLMQQPKVPVQQQMLQSTTTLLPNQGQQSQSQPAQQQMMSQSQSQPGQLQPPLGLQQQ
ANQLQREMQQRLQPSAPLLQQQNVMEQQKQLYQSQRVAPEASSTSLDSTAQTGNANAADW
QEEVYQKIKSMKESYLAELNDLYHKIASKVQQHDSLPQRPQNEQIEKLKMFKITLERIVL
FLRLNKQDIQLSHKEKLASVEKHISFFLSSNRPRSKPSSSPLQGQLPQSSMQLQQPPSLD
GQSNPSMQPAQGSMAAMPQNNLTNLQHNTLSGVPTISNSQQHMINTVQPGSTVDLGQGNS
LNSLQQVATGSLQQNPVNSPQQVNMSSLSSQSGTNPVQANLGSLQQNSNALQQSLPKQHE
QQMLQNQQLRQQYHHRHMQQQLFQRQQIIQQQQAKQQQTTLLPTHPMSQLQQMTDANDLK
IRQQMGIKPGVLQQQSVGQRVGSHHPQLKPGISSPQLHQALSPQVTQHPSPQIDQQNMLA
SLTKAGTPLQSASSPFVVPSPSTPLAPSPMPGDSEKVCAGLGSHTTAGNIMHQQATVASA
PAQSLAIGTPGISASPLLAEFTPLDGTHANVSAAVPGRSSVEQPLDRLMRAVKNMSDKAL
QSSVQDIYSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNYFTQDGPTGTKKMK
RYTTSNVVSSSSSLNDSFWQVNYSETPELESTATSNAKRPKIEVNIALVEEIQKINRQLI
DTVVEISDEGVDPSALAAATEGGEGTTVKCSFTAVALSPNLKALYASAQMSPIQPLRLLV
PVNYPNCCPILLDKFPVEVSKEYEDLSTKAKSRFSVSLRSLSQPMSLKDIVKTWDVCARA
VICEYAQQSGGGTFSSKYGSWENCSTAA
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaataattggagggccgctcaggctcaggctcaggctcaggctcagggaggt
ggtgaaggtggtggagcggctgccggagctatggagtccggtgattggaggactcaactt
atgcccgattcgcgtcaaagaattgtgaataagataatggagaccttaaagaggcatctt
cctgtttctgggcaagaaggagtacaggagcttaagaaaattgctgtaaggtttgaagaa
aagatctattctgctgctacaagtcagcaagattatcttcggaagatatctttaaagatg
ctgaccatggagacaaaatctcaaactcctatgaccaattctgttcagccaaatcctgca
agtagtggtcagaatgcccttggtccaggatcgcacagtatgcaatcccaagtcaacagc
caagcacagcaacttcctgtacctatggtgggcaatcaaactcaaacacgacaaccactg
ttgcagcaaaaccttcagaacaatatggcatcgactgggctgcaaaattctgctagcttg
gctccttcacttccttctgtgagtaatttgacgcagggtaccatgccaaatgtcgtgggc
cagaattcaaatttgcaaaccatgcaaaacatgccaaatgttggtcaaaacttggtagca
aatgccattgggcaaggcatgcctcctaatatggttgctaattctcagaggcagatgcag
ggaagacaacaacaggttgtttctcaacagcaacagcagcagtcccagacaacacagcaa
tatatgtaccagcagcaactgcatcagcatcaaatgatgaagcagaaatttcagccggga
agcacatcacagtccttgatgcaatctcacatgcagcaacagcaacagcagcagccgcag
gagcagcagcaacaactaccacagcagcaacaaaaccttctacaacctactcagacacaa
ccttctcagcaagctatgatgcaaccttcttcaatacaatcaacttctttgtccaacctt
cagcagagtcaacagtcgactgttcaacagtcaactcaatctgtacttcaccaacggcag
caatcagttatgagacagcagcaggctcccatgcttcatcaacagcaatcgtcaatgcta
cagccaccaattttaccagcgcaacagcaccaacaacaacaacaacaacagcagctgatt
gcacaacagacaaatgttgcaaatctccagcagaaccaattgatgagtcaacagaataca
atgcctgatgtgcagcagaggctagtgggccaacagaacaactatatgcatcagcaaaac
aactttcaaaatatgcatcagcagcagttgggctctcaaagtagtattgctggggtccag
caacaacagctgtctggaagtcaacaacctggtaactctggcttgacatctaatcagcac
cctatccatttgatgcaacaaccaaaagttcctgtacaacaacaaatgctgcagagtact
acaaccttgttaccaaatcaaggtcaacaatcgcagtcgcagccagcacaacagcaaatg
atgtctcagagtcaatcacaaccaggacagttacagccacctttgggtttgcagcaacag
gcgaatcaattgcaaagggagatgcaacagaggcttcaaccatcagcccccttgcttcaa
cagcaaaatgtaatggaacagcagaagcagctatatcaatcacaaagagtcgcacctgaa
gcctcatcaacatctttagattctacagctcagacgggaaatgcaaatgcagctgattgg
caggaggaggtttaccaaaagataaagtctatgaaggagtcgtatttagcagagctcaat
gatctataccacaaaattgcttctaaagtgcaacagcatgattctcttcctcagcgtcct
caaaatgagcaaattgaaaagctcaagatgttcaagatcacgctggaacgcattgtgctt
ttcttgcggcttaacaagcaggatattcaactttctcataaggaaaagttggcttcggtt
gagaagcacataagtttctttcttagttccaataggccgcgcagcaagccttcttcttct
ccactgcagggacaacttcctcagtcttccatgcagcttcagcaaccaccatctcttgat
ggtcaatctaatccgtcgatgcaacccgcacagggttccatggcagcaatgcctcagaat
aatctcaccaacttgcaacataataccttgtctggcgtaccgacaatttccaactcccag
caacacatgataaatacagtacagcctggttccactgtggatttgggacagggtaattca
ttgaactcactgcagcaggtggctactggctctttacaacagaatcctgttaacagtcct
caacaagttaacatgagctcattaagctcacaaagtggaacaaaccccgtacaggcaaac
ctcggttccctacagcaaaattcaaacgccctgcaacagtcacttcctaagcagcacgag
cagcaaatgttgcagaaccagcaattaagacagcaataccaccataggcatatgcagcag
caactttttcaaagacagcagataatacaacagcagcaagcgaagcaacagcagaccacg
ctgttgccaacccacccgatgtctcagcttcaacagatgactgatgctaatgacctaaag
ataaggcagcaaatggggataaaaccaggagttttacagcaacagtcagttggccagcgt
gttggatctcatcatccccaattgaagccaggaatatcttcacctcaactccatcaagca
ctgtctcctcaggttacccaacatccttctccacaaattgaccaacaaaatatgttggcg
tctcttacaaaagctgggactcctctccaatccgcaagctcaccatttgttgtcccttct
ccttcaactcccttggctccatctccaatgccgggagattccgaaaaagtttgtgctggc
cttggatcacataccacagctggaaatataatgcatcagcaagctactgttgcttctgca
cctgcccaatcccttgcaattggtactcctgggatatcagcctcacctttgcttgctgag
tttactcctctagatggtacacatgccaatgtctcagctgctgttcctggcaggtcaagt
gttgaacaaccattggatcgcttgatgagagcggttaaaaacatgtctgacaaagcattg
cagtcgtcagttcaagacatctattcagttgtcagtatgaatgatagaatagcgggatct
gctccaggaaatggatcaagagcagctgttggcgaagatttggttgccatgaccaaatgt
cgtctccaagcgagaaactactttacgcaggatggacctactggaacaaagaaaatgaag
cgatatacaacttccaacgttgtgtcgtcaagcagcagtttaaatgatagtttctggcag
gtgaattattctgaaacacctgagttagagtcaacagcaacatccaatgccaaaagacct
aaaatagaggttaatattgcactggttgaagagatacagaaaatcaatcggcaacttatc
gacactgttgtagaaattagtgacgaaggtgttgatccaagtgctcttgctgctgcaaca
gagggtggtgaaggcactactgttaagtgttctttcactgccgttgcattgagtccaaac
ttaaaagcactatatgcttcagcgcagatgtctccaattcagcctttgagattgctcgtt
ccagttaattatccaaactgctgtccgattctgttggacaagttcccagttgaagttagt
aaagagtatgaagatctatccacaaaggccaagtcaaggtttagtgtctccctgcgaagt
ctttcacagccaatgtctttaaaagacatagtcaagacttgggatgtttgtgctcgtgct
gtaatttgtgaatatgcacagcaaagtggaggaggaaccttcagctcaaagtatgggtct
tgggagaattgttcgactgcagcatga
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