Solanum pennellii: 107017846
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Entry
107017846 CDS
T04130
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Pathway
spen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107017846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107017846
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107017846
INO80 complex (yeast)
107017846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
107017846
NCBI-ProteinID:
XP_015073607
LinkDB
All DBs
Position
4:complement(7320426..7338008)
Genome browser
AA seq
1539 aa
AA seq
DB search
MDPKKQYSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGTAGNQSNGTMSGR
ELKKKRRTSYSSDEDGDRDRAHTTYISEEKYRTMLGEHVQKYKRRLGNSSASPAAIRNGV
PVMRGGGGSRDQKSANDHRGGAVRLASTSEFFNNSTQSLGNHIQSDFLGPYGGDRSIYEP
AFLDLGEDITYKIPPPYEKLALSLNLPTMSDIQVNEIYLKGTLDLETLAAMMASDKKLGT
KRQAGMGDPRPQFESLQARLRAQPTNNAGQRFSLQVSEAALEASSMPEGAAGGIRRSILS
DGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLEKDPFAIEKEEMERIGKCWINLARKEIP
KHHKIFINFHRRQLTDAKRIAEMCQREVKMKVSRSLKVMRGAAIRTRKLARDMLVFWKRV
DKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKSTLPSEAV
TLGDEMINDPEILLASTEVRPGEEEDPEEAELRKEALKAAQDAVSKQKMMTSAFDSECLK
LRQAAEIEPSQQDAAAADIDLLHPSTMPVASTVQAPELFKGTLKDYQLKGLQWLVNCYEQ
GLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEIGRFCPDLKT
LPYWGGLQERVVLRKNINPKRLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQ
AIKSANSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWFSK
GIENHAEHGGSLNEHQLSRLHAILKPFMLRRVKKDVVSELTGKTEITVHCKLSSRQQAFY
QAIKNKISLAELIDSSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYFYFGDVP
YSLLPAPFGELEDVFFSGGRSPVTYQMPKLVYRGANKSSMLHSTMGQGVSKELFEKYFNI
YSPENIHRSILQEIHESDVGYIRSGTFGFTRLVDMSPMEVAFSATGSLLEKLLFSIVRAN
RQFLDEILDLMESGDDDLCCSHLGRDKVRAVTRMLLLPSKSEANFLRTRLATGPGDAPFE
ALAMEHQDRLLANVNLLNSIYSFIPRTRAPPINAHCSDRNFAYEMLEELHHPWIKRLLVG
FARTSEYNGPRKPGAAHHLIQEIDSELPITQPALQLTYQIFGSCPPMQPFDPAKMLTDSG
KLQTLDILLKRLRAGNHRVLIFAQMTKMLDILEDYMHYRKYRYLRLDGSSTIMDRRDMVK
DFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTV
YRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEQKMKEI
PLQAKERQKRKGSTKGIRIGADGDASLEDLTNSEFVGDDALEPEKAKSSNKKRKGSTDKQ
TPRSRPQKNPKNLQSASPNSLLEDDIDGFPQNIGMQQQRPKRQKRPTKSVNESLEPAFTA
TIPMNREGNHNHPLSDISSGGGRGGAEEEGLRHNNPYAG
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggaccctaagaagcagtattcgtactccaatctcttcaatctcgagtctttgattaac
ttccagctgccccaacttgatgatgattttgattatcatgggaatagcagtcaggacgag
agcagaggtagcccaggtggaacggccggaaaccagagtaatggtacaatgtctggtagg
gagttgaagaaaaagaggcgaacttcatatagtagtgacgaggatggggacagggataga
gctcatactacctatatttcagaggaaaagtatagaacaatgctgggagaacacgttcaa
aagtataagaggaggcttggtaattcctcagcaagccctgcagctattcgtaatggagta
cctgtgatgagaggtggtggaggttcaagagaccagaagtcagcaaatgatcatagagga
ggagcggtcagacttgcctctacatcagaattttttaacaatagcactcagagcttagga
aaccatattcagtcagattttctaggaccatatggtggtgatagatctatttatgaacct
gctttcttggatcttggggaggacatcacatacaagatccctccgccttatgaaaagctg
gcattatcattgaacttgccaaccatgtcagatattcaagttaatgaaatttacctcaag
ggtacacttgatttggagactttggctgcaatgatggcttctgataagaaacttgggacc
aaacgtcaggcaggaatgggtgatcccaggccacaatttgaatctcttcaggcacgactg
cgagctcagccgactaataatgccggtcagagattcagtctgcaagtcagcgaagctgca
ttagaggcttcttccatgcctgagggggctgcaggtggtatacggcgttccatattgtca
gacggtggtgtcttacaggtttattatgtgaaagtgttagagaaaggagacacctatgag
attattgaacgtagtctacccaaaaagccaaagttggagaaagatccttttgcgattgag
aaggaagaaatggaaaggattggaaaatgttggataaaccttgccaggaaagaaatccca
aaacatcataagatatttatcaatttccacaggaggcaattgactgatgccaagcggatt
gcagaaatgtgtcagagagaggtgaaaatgaaagttagcagatcacttaaggtgatgaga
ggtgcagcaattcgtacaaggaaacttgctagggacatgctcgtgttttggaagagagtt
gacaaggagatggcagaagtaaggaaaagggaggaaaaagaagcagcagaagctttgaag
cgtgaacaagagcttcgtgaagcaaagagacaacaacaaaggctcaactttctgctatca
caaactgaactttacagccatttcatgcaaaataaatcgactttaccctctgaggctgtg
actttaggtgatgaaatgataaatgacccagaaatattgttagcttctactgaagttaga
cctggagaggaagaggatcctgaagaggctgaactgagaaaagaggctctgaaagctgca
caggatgcagtttcaaagcagaaaatgatgacaagtgcatttgatagtgaatgtctaaag
ctgcgtcaagctgctgaaattgaaccctcccagcaagatgctgcagctgctgacatagac
ttattgcatccgtcaaccatgcctgtggcttctacggtacaagcaccagaattattcaag
ggtactcttaaagattatcagttgaaagggctccagtggcttgtaaattgttacgagcag
ggtttaaatggcattcttgctgatgagatgggtcttgggaaaacaatccaggccatggct
ttcttggctcatttggcagaagaaaagaatatatggggtccctttttagttgttgctccc
gcatcagtcttgaacaactgggctgatgaaattggtcgtttctgccctgatctaaaaact
cttccatattggggaggtttacaagaacgagtggtgcttcgaaagaacattaacccaaaa
cgtctttatcgtcgggatgctggattccacattctcattaccagttatcaactactagtt
tctgacgagaaatactttagacgtgttaaatggcaatacatggtgctggatgaagcccag
gcaatcaaaagcgcaaacagtataagatggaagacattgctgagtttcaattgtcgaaac
cgtttgcttctgactggtactccagttcaaaataacatggctgagctgtgggcgctcctc
cactttattatgcctaccttatttgatagccatgaacaatttaatgaatggttttcaaaa
ggaatcgaaaaccacgcggagcatggtgggtcactaaacgagcaccagctcagccgtctg
catgcaattttgaaacctttcatgctgcggcgggttaaaaaggatgtggtttctgagttg
actgggaaaactgaaatcacagtgcactgtaagttgagttctcgtcagcaggcattttat
caagcaataaaaaataagatatcccttgctgagttaattgatagcagccgtgggcatctt
aacgagaagaaaattctaaacctgatgaatattgttatccagctaaggaaggtttgcaat
catccagagctctttgagagaaatgaaggaagttcttacttttattttggagatgttcca
tattcacttcttcctgctcccttcggggaacttgaggatgtattcttttctggcggtcga
agtcctgttacataccagatgccaaagctggtttaccggggagctaataaatcgagcatg
cttcactctactatggggcaaggtgtaagtaaagaattatttgagaagtactttaacata
tattctccagagaatattcaccgctcaatactccaagaaattcatgagtcagatgttgga
tatatacggagtggaacattcggttttactcgcttagttgatatgtcacccatggaggtt
gcattttcggcaactggttctttattggagaaattgttattctcaattgtgagagccaac
agacaatttttagatgaaattttggacttgatggagtctggggatgatgatctctgttgt
agtcaccttggaagggacaaagtaagagcagtgacacgaatgttattgcttccatcaaag
tcagaagcaaactttttaagaacaagacttgcaacagggcctggtgatgcaccatttgag
gctttggccatggaacatcaggataggcttttagctaatgttaatctcttgaattcaata
tactcctttattcctagaacaagagcacctcctataaatgctcattgctcagatagaaat
tttgcttatgaaatgcttgaagaactacaccatccatggattaaaaggttgttggttggg
tttgcgcgcacttcggaatataatggtcctaggaaaccaggtgctgcacaccatttaata
caagagatagactctgaattacccatcacacaacctgctcttcagcttacgtatcaaatt
tttgggtcatgtccacccatgcaaccatttgaccctgcaaagatgctaacggactcaggg
aagcttcaaacacttgatatattattaaagcgtttgcgagctgggaatcaccgtgttctt
atctttgcacaaatgacaaaaatgttggatattctagaggattacatgcactacaggaaa
tataggtacttgaggcttgacggatcttccactataatggatcgacgagacatggtcaaa
gatttccagcatcggaacgacatctttgtgttcttgctgagtacaagagcaggggggctt
ggtatcaacttgacagctgctgacactgtcatcttctatgagagtgactggaatccaact
ttagatttacaagcaatggatagagctcataggctgggtcaaactaaggatgttactgtt
tatcgcttaatctgcaaagagacggttgaagaaaaaattctgcagagagccagtcagaaa
aacaccgtgcagcagcttgtcatgacaggtggacatgtccagggtgaccttttggctccg
gaagatgttgtttctttgttgattgatgatgcacaattggagcagaaaatgaaggaaatt
cctcttcaggctaaagagagacaaaagaggaaaggtagcacaaaaggcattcgtattggt
gcagatggtgatgcatcattagaagatcttacaaacagtgaatttgttggggatgatgcc
cttgagccggagaaagcaaaatcaagtaataaaaagaggaaaggttccacagacaagcaa
accccaagatcaaggcctcaaaagaatccaaaaaatctacaatctgcatcacccaactca
ctattggaagatgatatagatgggtttccacaaaacattggcatgcaacaacaaaggcca
aaaagacagaagaggccaactaagagcgtaaatgagagccttgaaccagcatttactgcc
accattcctatgaaccgagaggggaaccataaccatcctttgtcagatatcagctctggt
ggtgggagaggaggggctgaggaagagggattgagacataacaatccgtatgctggctaa
DBGET
integrated database retrieval system
