Solanum pennellii: 107017962
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Entry
107017962 CDS
T04130
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107017962
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107017962
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107017962
03036 Chromosome and associated proteins [BR:
spen03036
]
107017962
Protein phosphatases and associated proteins [BR:
spen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107017962
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107017962
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107017962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
107017962
NCBI-ProteinID:
XP_015073766
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Position
4:3555901..3570486
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AA seq
539 aa
AA seq
DB search
MDVDFNGDVASLDAELLQLPELSPLAIKTNPFVAEKLFDQWLSLPDTAALVKSLIKNAKG
GGPLNVSTTSSGTNVAATNSLPSMFPAGSTPPLSPRSSSGSPRISKHRAGPSSLGSPLKL
INEPAKELIPQFYFQNGRPPPNELKERCLFRINQFFYGHTDGLQMNEFKPITKEICKLPS
FFSAVLFKKIDVDGTGVITRDAFVDYWIHGNMLTKDIATQMYTILKQPDLRYLVQDDFKP
ILRELLATHPGLEFLQSTPEFQERYAETVVYRIFYYVNRSGNGRLTLKELRRSDLIAAMQ
HADEEDDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDMDGNGVITRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQIVDMVSPENESYFTLRDLKGSRLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSADVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggattttaatggtgatgtagcgagtttggatgctgagcttttgcagttacct
gagttgtctcctttggctattaaaacgaatccttttgttgccgagaagctatttgatcaa
tggctttcgcttcctgatactgccgctttggtgaaatctttgattaagaatgccaaaggt
ggcggtccattgaatgtgtctactacatcttctgggacaaatgtcgcggcaactaattct
ttgccgtccatgtttcctgctggaagtacacctccactttctccaagaagttcatctggt
tcacctcgaatctcaaagcacagggctggaccctcttcattggggtctcctctgaaatta
attaatgagcctgcaaaagaactgataccacagttttactttcaaaatggtcgcccccct
ccaaatgaattgaaggaacgctgcttgtttaggataaaccagttcttttatggtcacaca
gatgggctacaaatgaatgagtttaaaccaattacaaaggaaatatgcaagctgccctcg
ttcttctccgctgtactttttaagaagatcgatgttgacggcactggcgtcataaccagg
gatgcctttgttgattattggatacacggcaacatgttgacaaaagatatagcaactcaa
atgtacacaatcttgaagcagccggaccttagatacctcgtgcaggatgacttcaaaccc
attcttcgggaacttttggcaacacatccagggttggagttcttacagagcacacctgaa
tttcaagagcgttatgctgaaactgtagtatacagaatattttattacgtcaatcgatcg
ggtaatggccgtcttaccctcaaggagctgagacgttctgaccttattgctgcaatgcaa
catgcggatgaagaggatgacattaacaaggtcctaaggtacttctcgtatgaacatttt
tacgtgatatattgcaagttttgggagcttgacaccgatcatgattttctcattgataaa
gagaacctcattcgatatggcaaccatgcccttacgtacaggattgttgatagaatattt
tctcaggttcctaggaagttcaccagtaaagttgaagggaagatgggctacgaagatttt
gtttactttatattgtcagaggaggataaatcatcagagcctagtcttgaatactggttc
aaatgcatagatatggatggaaatggggttataacaaggaatgagatgcaattcttttat
gaggagcagttgcatagaatggaatgcatggcccaagagccagtgctttttgaggatatt
ttgtgtcaaatagttgacatggtcagtccagagaatgaaagctattttacattacgtgat
ttgaagggaagcaggctctccggtagtgtttttaacatactttttaacctcaataagttc
atggcctttgaaacccgcgaccccttcctaattcgtcaggagcgtgagaacccaaatctg
actgaatgggatcgcttcgctcacagagaatatattaggctctcaatggaggaagatgca
gaggatgcctccaatggaagtgcagatgtctgggatgaatcactcgaggctcccttctga
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