Solanum pennellii: 107017975
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Entry
107017975 CDS
T04130
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107017975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107017975
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107017975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
107017975
NCBI-ProteinID:
XP_015073778
LinkDB
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Position
4:complement(7206058..7215953)
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AA seq
862 aa
AA seq
DB search
MANDVDMSGWSELLHSSSKLLEQAAPSAQFPPLQRNLDQLEALTKKLKAKTLRTEAPTQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATTVEEYLQQIHEMAMVSAVQEA
QKDNLKNFNDYMMKVLENDWKKEKRDFLQSLSRISTLPRTNISESSPLRGRQGQIASLTY
SPQISSGPSSMEPLALTNRPIVEKKAAAYGEVVKNLTSARERGLPFKPATAFKCALESLG
LNASGGKSVGIQKIWHLLSSLMGEDSAIRHNVSKKMSLVIGARRHLEWGHEKYIMETIQA
HPAQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDAADARRQPPVDTTWQQIYFCMRTGYF
NEAREISQQSRMSHQFAPLLTEWISTGGMVSAEMAAVASEECEKMFRLGDRGGRPTYDKK
KLLLYTIISGSRRQIDRFLREFPTLFSTIEDFLWFQLSAVRESPARSSAVLSEGLAPYTL
DDLQAYLNKFESSHYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKDMGDEGYNVDAVHMAI
VLADYGVLSEGTWVGQKFGVMDAFAEASSIIRQYGSFYLRHGDLLMSLEYYVQAAAAVGG
GQLSWSGRGNIDQQRQRTSMLKQLLTELLSRDGGIDILLGPRGTGEEGQLGRFLTDEKTR
QQFLLEAARQYQDAGLYDKSIEIQKRVGAFSAALDTINKCLSDAICALARGRLDGESQTS
GLILSGNEILEMFKYYPEISPQERENVLAQQIVLRQLEAVLSIHKLARLGNHLDAIKEVA
KLPFLPLDPRTPDFATDIFQNLSHHVQACVPDLLKVALHCLDNVKDSDGSLRALRAKIAN
FLASNLNQNWPRDLYDKVARSL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgacgtagacatgagtggatggagtgagcttcttcattcttcttcgaagctt
ctagaacaggctgctccttcagctcagtttcctccgcttcagaggaatttggatcaattg
gaagcattaacaaagaaattgaaggctaaaactttaagaactgaagctccgactcaatct
attgcagcaactaggctactagctcgtgagggtatcaatgcagagcagcttgctcgtgat
ctcaagtcttttgagttaaagacgacatttgaagacgtttttcctgcggaggcaacaact
gttgaagagtatttgcaacagatccatgaaatggcaatggtctctgcggttcaagaagct
cagaaggataacctaaaaaatttcaatgattacatgatgaaagttttagagaacgactgg
aagaaagaaaagagagacttcctccagagcctaagccgaatttcaaccttacctaggaca
aatatcagtgaatcaagccctctacgtggtcgtcagggacaaatagcatctttgacatat
agccctcagatttcatctggtccttctagcatggagcctttagcattaactaataggccc
atcgttgagaaaaaagctgctgcatatggagaagttgtcaagaatctcactagtgcaaga
gagcgtggtttaccctttaaacctgctacagcttttaagtgtgctcttgagagtttgggt
cttaatgcatctggtgggaagtcagttggcattcagaagatctggcatctattgtcgtct
ctgatgggtgaagattcagctattcgacataatgtttcaaagaaaatgtctttagtaatt
ggagctagacgtcacctagaatggggtcatgagaagtacatcatggagacaattcaagcc
catcctgctcaggctgcacttggtggtgctgttggtaatttgcagagaatccgtgccttt
ctcaggatccgtctaagggactacggggttcttgattttgatgctgctgatgcccgtaga
cagcctcccgttgataccacctggcagcagatatacttttgcatgagaactggctacttc
aatgaagcaagagagatttcccaacaatctcgcatgtcccaccagtttgcacctctgctt
acagagtggatttccactggaggcatggtatcagcagagatggcagcggttgcttcagaa
gaatgtgagaagatgtttaggttgggtgatcgaggaggtcgacccacgtatgataagaaa
aagttgctactctacaccataatttctggttctcgcaggcaaattgacagatttcttcga
gagttccctacgcttttctctactatagaggatttcttgtggttccaattatctgctgta
cgtgagtcccctgccaggtcttctgctgtccttagtgaggggttggcaccttacactttg
gatgatttgcaagcttacctaaacaagtttgagtcatcacactatactaagaatggaaag
gatcctttggtttatccatatgttttacttttaagcattcaacttcttccagccgtccta
tatttgtccaaggacatgggagacgaggggtataatgtagatgctgttcatatggctatt
gtcttagcggactatggggtcctctctgaaggtacatgggtaggtcaaaaatttggggtc
atggatgcttttgctgaagcctctagtataattaggcagtatggatcattttacctgcgt
catggtgatctgttaatgtcattggagtactatgtgcaagctgcagcagcagtgggtggt
gggcagttgtcgtggagtggacgtggtaatattgatcagcaaaggcaaaggacttcaatg
ttgaaacaacttcttacagagctattgtcgcgggatggtggtattgatattttacttggt
cccaggggtactggagaagaaggtcaacttggaaggtttttgactgatgaaaagacaaga
caacaatttctgcttgaagctgctcggcagtatcaggatgcggggctctatgacaagtcc
atcgagattcagaagagagtgggggcattttcagctgcattggatacgataaacaagtgc
ctttctgatgcaatatgtgccttggcacgtggaaggttggatggggaaagccagacttct
gggcttattctttcaggaaatgagatcctggagatgttcaaatattaccctgagatcagt
ccccaagagagagaaaatgtgttggcacagcaaattgttctaagacagctggaggctgtg
ctatccattcataagcttgcaagacttggaaatcacttggatgctataaaagaagtagcg
aagctcccattccttcctttggatccaaggacgcctgatttcgcaacggatatctttcaa
aatttgtctcatcatgtccaagcttgtgtacctgacctcctaaaagttgctcttcattgt
ctggacaacgttaaagattctgatgggtcacttcgtgctttaagagccaagattgcaaac
ttcctggcaagcaatttgaatcagaattggcctcgcgatctgtatgacaaggttgctcgc
agtttatga
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