Solanum pennellii: 107017986
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Entry
107017986 CDS
T04130
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107017986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107017986
Spliceosome [BR:
spen03041
]
Common components
Common spliceosomal components
SR proteins
107017986
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
107017986
NCBI-ProteinID:
XP_015073791
UniProt:
A0ABM1GNS9
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Position
4:70760342..70766077
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AA seq
258 aa
AA seq
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MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRILEPVQRPKGRSRSR
SPRPRHRDHRDKDSRRRSRSRSRSRSRGRYERDQYRGRDRDNRHRSRSRSPDYHRGRGRG
KYDEDRRSRSRSHGRSASPARRSPSPRRSPSPRRTTPPRDASPDGRNHKDRSPTPKSISP
RGRRAGSRSPLPRSDADD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggtagatcaggcccaccggacatcaaagacacctactctctgctcgtt
ctcaacgttacttttcgtaccactgctgatgacttgtttcctctattcgataagtatgga
aaagttgtcgatgtctttatccctagagaccgaaggactggagattctaggggttttgca
tttgtgcgctacaagtatcaggatgaggctcaaaaagcagtggaaaagcttgatggaaga
gttgtagatggtcgggaaatcatggttcgatttgcgaagtacggccctaatgctgagaga
attgacaaaggtagaattttggagcctgtacaaaggccaaaagggaggtcaagaagccgt
agtcctagaccaaggcatcgtgatcatagggacaaggattctagaaggagaagccgaagt
agaagtagaagtagaagtaggggaaggtatgagcgtgatcagtaccgtggaagagacaga
gataaccgtcatcggagcagaagccgcagccctgattaccacagaggtcgtgggagaggt
aaatatgatgaggacaggcgcagccgaagtcggtctcatggaagaagtgcctcccctgct
cgccgtagccccagtcctcgaaggagcccttctccacgaagaacaactcctcctagggat
gctagtccagatggacgtaatcacaaggaccggtctccaactccaaagagtatatcaccg
cggggtagacgtgctggttctcgcagccccttgccacgttctgatgctgatgattga
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