Solanum pennellii: 107017996
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Entry
107017996 CDS
T04130
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
spen
Solanum pennellii
Pathway
spen04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107017996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107017996
Membrane trafficking [BR:
spen04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
107017996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
NACHT
AAA_22
NPHP3_N
IstB_IS21
AAA_5
RuvB_N
RNA_helicase
AAA_14
nSTAND3
AAA_29
Bac_DnaA
AAA_7
AAA_19
ABC_tran
AAA_11
Sigma54_activat
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
107017996
NCBI-ProteinID:
XP_015073807
LinkDB
All DBs
Position
4:complement(66806742..66827334)
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AA seq
1128 aa
AA seq
DB search
MELEVRVVAGIESCFVSLPVTLLQTLESTTASGYLPPVLALELRSGNNLWRLAWSGSASS
NPFPNSIQIAKQYAECIGLLDRTVVQVKVVSNLPKATMVTIEPDTEDDWEVLELNAEHAE
QAILKQVAIVYGAMRFPLWLHGQTIITFKVVSTFPLTPVVQLVPGTEVAVAPKRRKRNIS
SGEESMMQDDELSVSKALLRVQDTDDQCIHKYEAEGVEMSVVLTSAIFIHPETASIYSFE
PLQTVVIIPRLLPRETKKNHETDSRRGKSSVTSKEGNVGVLPDKHDIHQAMVRLIFSESV
AKGHIMLPRSIRLYLKAELHSCVYVKRFNVKLKKEIPPVLLSPCEFKIFQETGVSEENNA
EALGKNNNNKTLTTVLRTNSDIEMGSSDWSIHEEIAAAFSYESSKEDKEMSIKSDIKKDI
AAILHRWCLAQLHAVKIKAGVEVKSLILGNTTLLHFKAKDSRSIKHGVQTMNGGETSLDA
MYVLSTTDGSLRDEAIDAYEVVFDEGSKLTTSPKSFEPWLGKLQLGNGISIRTVREKLFA
KSTSLTTSSLDWMGTAAPDVINRLVVLLSSASWMLSSAYDFPLPGHILIHGPSGSGKTLL
ATVAAKFAEESEDILAHIIFLSCSKLALEKPSAIRQALLSYVADALDHAPSVVVFDDLDS
IVAASSESEASQPSSSSAVLAEYFADIMDEYEEKRRNTCGIGPVAFIACAQSLTNLPQKL
TSSGRFDFHVKLSAPATTERGALLKHIIQKRSLQCSDDTLLDIASKCDGYDAYDLEILVD
RSVHAATARFLSSDLAVGSREKPVLFQDDFLRAMHEFVPVAMRDITKPAADGGRSGWEDV
GGLNDIRNAIIEMIELPSKFPNIFAQAPLRMRSNVLLYGPPGCGKTHIVGAAAAACSLRF
ISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVN
QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSQHERSEILSVLSR
KLPLASDVDLDVVAHLTEGFSGADLQALLSDAQLEAVHDLLDSENAGKPDKKPVISDALL
KSIASKAKSSVSDAEKQRLYDIYSQFLDSKRSVAAQSRDAKGKRATLA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaggtgagagttgtcgccggaattgagagctgcttcgtatcgctaccagta
acattactccagactctcgaatccaccactgcttccggttaccttcctcctgttctagcc
ctcgaacttcgctccggcaacaatctctggcgcctagcttggtctggttccgcttcatcc
aatccatttcctaattcaattcagattgcgaagcaatatgcggagtgtattggattgttg
gatcgtactgtggttcaagtaaaagtagtgtccaatttgcctaaagctactatggttacc
atagagccggatactgaagatgattgggaagttttggagcttaatgctgagcatgcagag
caggctatcttaaagcaggttgctattgtctatggagcaatgcgatttcctttgtggctg
catgggcaaacaattatcacatttaaagttgtttcaacctttccgctgacaccggtagta
caacttgtccctggtactgaagttgctgttgctccaaaaaggcgcaaaagaaatattagt
tcgggtgaggaatccatgatgcaagacgatgagctttcggtctcaaaggcactattgaga
gtccaagatactgatgatcaatgtattcacaaatatgaggccgagggagtcgagatgagt
gtggttttgacttccgctatcttcattcatcctgagacggccagcatatactcttttgaa
cctcttcagactgtggttataattcccagattgcttcccagagaaaccaagaagaaccat
gagacagatagccgtagagggaaaagtagtgtaacttcaaaggaagggaatgtaggagtt
ctacctgacaagcacgatatccatcaagcaatggttcgcctaatattttcagaatctgtg
gctaaaggacatatcatgcttcctcggtctattcggctttatttgaaagcagagttacac
tcatgtgtatatgtgaagagattcaatgtcaagttgaagaaggagattcctccagttttg
ctttcaccttgtgaattcaagatattccaggagactggggtttctgaagaaaataatgct
gaggctttgggcaagaataataataataaaacattaacaacagttttgagaaccaattca
gacattgagatgggttctagtgattggtcaatccatgaggaaattgccgcagccttttct
tatgaatctagcaaggaagacaaagaaatgagcatcaagtctgatatcaaaaaggatatt
gcagctattttgcatagatggtgccttgcacaactacatgctgtcaagatcaaggccgga
gtggaagtgaaatcgttgattttagggaacacaactttgcttcacttcaaagcgaaagac
agcagatccataaaacatggtgttcaaacaatgaatggtggagaaacatcattagatgcc
atgtatgtgttgtcaactactgatggctcattacgtgatgaagcgattgatgcttatgaa
gttgtattcgatgaaggaagcaagttgactaccagcccaaaaagctttgaaccttggctt
ggaaagcttcaactgggcaacggtatttccattagaactgtcagagagaaattatttgct
aaaagcaccagtcttacaacttcttcattagactggatggggacagctgcacctgatgtg
attaataggttggtagttttgttatcttctgcatcttggatgttgtccagtgcttatgat
tttccgctgccaggacatatcctaatccatggtccttctggttcagggaaaacattatta
gctacagttgctgctaaatttgctgaagaaagtgaagacatcttggcccatataatattc
ttatcctgttctaagcttgctttggaaaagccttcagccattcgtcaagctttattgagc
tatgttgctgatgctttggatcatgcaccttctgttgtggtgtttgatgatcttgatagc
attgttgcagcttcctctgaatcagaggcttctcaaccttcatcctcatcagcagtgctt
gcagaatattttgctgatattatggatgaatatgaggaaaagaggaggaacacgtgtggg
attggcccagttgcatttattgcttgtgcacagtctctgactaatttaccacagaaattg
acctcttctgggaggtttgactttcatgttaaattgtctgcacctgctaccactgagcgt
ggtgccttgctaaaacatatcattcagaagcgttcgttgcaatgttctgatgacaccttg
ctggatatagcctccaagtgtgatggatatgatgcatatgatctggaaatactggttgat
agatctgttcatgccgcaactgcccggtttttgtctagtgatttggctgttggcagtcgg
gaaaaacctgttttgtttcaggatgatttcctacgtgccatgcatgagtttgttccagtg
gctatgcgtgacatcactaaacctgctgctgatggtggccggtctggctgggaggatgtt
ggaggtcttaatgacatccggaatgctattatagagatgattgagttgccgtccaaattt
ccaaatatatttgcacaagctcctctaaggatgcggtctaatgttctgttatatggcccc
cctggttgtggcaaaacacacattgttggtgctgcagctgctgcatgttcactaagattt
atctcagtcaaaggtcctgaactgctgaataaatacattggtgcttctgagcaagctgtt
cgagatatattctcaaaagcagctgcagcagcaccatgccttcttttttttgatgaattt
gattctatcgcaccaaagagaggccatgacaacactggtgtcactgatagagttgttaat
cagtttctcacggaattggatggtgttgaagtgttaacgggtgtgtttgtatttgctgcc
acaagtagacctgatttgcttgatgctgcacttctgcgacctggaaggctggatcggctt
ctcttctgtgattttccttcacagcatgaaaggtcggagattctttcagttctatcaaga
aaattacctttggcaagtgatgtcgatttggatgtcgtagctcatttgactgaaggattc
agtggagctgacctccaagctcttctctctgatgcacagcttgaggctgtccatgatctt
ctagatagtgaaaacgcagggaagcccgataagaagccggtcatctctgatgctcttctg
aaatcaattgcatccaaggcaaaatcatctgtttctgatgctgaaaagcagcggttatat
gatatctacagtcagtttttggattcaaaacgatcagtggctgcacagtcgagagatgca
aaaggcaaaagagcaacccttgcttaa
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