Solanum pennellii: 107018093
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Entry
107018093 CDS
T04130
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107018093
Membrane trafficking [BR:
spen04131
]
Protein recycling
Others
EARP complex
107018093
Endosome - Golgi transport
Tethering complex
GARP complex
107018093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Vps54_N
COG7
RINT1_TIP1
COG5_N
HemX
XhlA
DUF401
Motif
Other DBs
NCBI-GeneID:
107018093
NCBI-ProteinID:
XP_015073952
LinkDB
All DBs
Position
4:50202060..50222309
Genome browser
AA seq
824 aa
AA seq
DB search
MAASDKQNTLDYINQMFPTEASLSGVEPLMQKIHSEIRRVDAEILTAVRQQSNSGTKARE
DLAAATSAVQELMNKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQVMASKRHYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQVLKSHV
FSDFSSLGTGKETEESNLLQQLSDACLVVDALEPSVREELVKNFCNRELTSYQQIFEGAE
LAKLDKTERRYAWIKRRLRTNEEIWKIFPRSWHVDYLLCIQFCKLTRSQLVEILVSMKEK
PDVATLLTALQRTLEFEEELAEKFGGGIRSKDSVDDNEETERSGNKTQTVSDIRKKYEKK
LAAHDGSQNEEQDGQKDSSVPGAGFNFRGIISSCFEPHLSVYIELEEKTLMDSLEKEMLE
ETWEIEEGSQTNILSSSIKVFVIIRRSLKRCSALTRNQTLFNLFKAFQKVLKAYATKLFA
RLPKGGTGIVAAATGIEGQIKTSDKDERVICYIVNTAEYCHKTCGELADNVSKLIDAQFA
DRVDMSEVQDEFSAVITKSLITLVHGIETKFDSEMAAMTRVPWSTLESVGDQSDYVNGIN
LILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYHNIFKCKQISETGAQQMLLDTQAVK
TILLEIPSLGKQTAGAASYSKFVSREMSKAEALLKVILSPIDSVADTYCALLPEGTLTEF
QRLLELKGLKKADQQSILDDFNKRGSGISQPTIMAPSSAPNTSIAPVITNTAASPGAITS
REDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccgacaagcagaacacgttggattacatcaatcagatgtttcctacagaa
gcatctctatctggtgttgagccccttatgcagaagatacatagtgaaattcgtcgtgtt
gatgctgaaatattgacggctgtccggcaacagagtaactctggaaccaaagccagagaa
gatcttgctgcagctactagtgctgtgcaggaactcatgaataagattcgagaaattaag
accaaagcagagcaaagtgaaacaatggttcaggaaatatgtcgtgatattaaaaaattg
gattttgcaaagaaacacattacaacaacaattactgcccttcaccgcctaaccatgcta
gtctctgcagtagagcaactacaagtaatggcttccaaacgtcactataaagaggcggca
gcacagcttgaggctgtaaaccagctctgtagtcatttcgaagcctatagggatattcct
aagattacagaacttagagaaaagttcaaaagcatcaaacaagtcctcaagtcacatgtg
ttctctgacttctccagtttaggcacagggaaggagacagaagaaagtaacctattacaa
cagttatcagacgcctgcttagttgttgatgctctcgagccttcagttagagaagagcta
gtgaaaaacttttgtaatagagaactcacctcgtaccagcagatatttgaaggagcagaa
ctagctaagttggacaaaactgaaagaagatatgcttggatcaagcgtcggctaagaacg
aatgaggaaatttggaaaattttccctcgttcatggcacgtcgattatttgctttgcatt
cagttctgcaagttgacaaggtctcaacttgtggaaatccttgttagtatgaaagaaaag
ccagatgtagcaaccttgttgacagctctgcagcgcactttggaatttgaagaggagttg
gcagagaaatttggtggtggaatccgcagtaaagattctgtagatgacaatgaagaaaca
gaaaggagtggaaacaagactcagacagtttcagatattcgaaaaaagtatgagaaaaag
cttgctgctcatgatggtagtcaaaatgaagaacaagatggacaaaaagattcatcagtg
ccgggagctggtttcaatttcagagggattatctcatcgtgctttgaacctcacttgtca
gtttatatagagctggaagagaagactctaatggatagtttggaaaaagaaatgctggaa
gagacgtgggaaattgaggagggaagtcagactaatattttgtctagcagcattaaggtc
tttgtaatcatcaggaggagcttgaagagatgcagtgctttgacgagaaaccagacattg
tttaatctctttaaggcatttcaaaaagttcttaaagcttatgctacaaaacttttcgct
agattgccaaagggtggtacaggaattgttgcagctgccacaggaatcgaaggacagatt
aagacttcggacaaggatgaaagggttatctgctacatagtaaatactgcagagtattgt
cacaaaacgtgcggagaattagcagataatgtgtcgaaactgattgatgctcaatttgcg
gatagagtggatatgtctgaagtacaggatgaattttctgcagttattacaaaatctttg
attacattagtgcatggaatagaaacaaagtttgactctgaaatggctgcaatgactcgg
gttccatggagtactctcgaaagtgttggtgatcagtcagactatgtcaatggcataaat
ttgatccttaccagtagcattccagtgcttggaagccttctgtctcctatttacttccag
ttcttcctggataagcttgcatcatctcttggtccacggttctatcacaatatcttcaaa
tgcaaacagatatcagagactggagcacagcagatgcttttagatacacaagcggtaaag
actattttgctggaaattccttctctgggaaaacaaacagcaggagctgctagctattca
aaatttgtcagtcgtgagatgagcaaagcagaagcattattgaaggtcatactgtctcca
atagattctgtggcggatacatactgtgcgctgctgccagagggaacactcacagagttt
cagcgtcttttggagcttaagggcctgaaaaaagctgatcagcagagcatactggatgac
ttcaacaaacgtgggtcgggcatctctcagccgaccattatggccccttcatctgccccg
aacacctcaatagcaccagtcataactaatactgcagcatcacctggggctatcacttca
agagaagatgtgctgacaagagcagctgctcttggaagaggtgcagctaccacaggcttt
aagagattcctcgcgttgacagaagctgcaaaagatcgcaaggacgggccatttaggaag
ttattcaatggatga
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