Solanum pennellii: 107018109
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Entry
107018109 CDS
T04130
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
spen
Solanum pennellii
Pathway
spen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107018109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107018109
03036 Chromosome and associated proteins [BR:
spen03036
]
107018109
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107018109
Coactivators
SAGA/TFTC/STAGA complex
107018109
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107018109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
ParG
Motif
Other DBs
NCBI-GeneID:
107018109
NCBI-ProteinID:
XP_015073978
LinkDB
All DBs
Position
4:73346356..73358959
Genome browser
AA seq
934 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGDNSQSQPSDSDSVPLSQGSSYTSN
QFAPWQTANHDENASRCNLQDSETIQPKEENVSDMQLKRLDTDSQNQQQKNDSSQEINSL
PVQHISQDSYQTTEVEQDTLHSSRAVNMPNPEKNTQNPESPHLNLQGTNNLQPMQSLTTG
TSSLPRVATVASNQSESATGSISQAAMNIAKQGKQVPFAMLFPHIQPQLDKDRAAQLQTL
YVKLKKNEISKESFVRNMRSIIGDQMLKMAVYKFQSQASKNSQSVPGQFPQSQASQQQHS
LMPADDSSSMAIESKAQKLHEVENQADLRGAQGSQMSSSSLTAVKQERDHTPFPIQGLNR
QQQQHLHFSQASFPTFANAGNNYSAYSASNVNSSTTQPLKQQSDDAQMRQISVQQNRNAT
QFGVPAQAMGIMSAPKFEKQNTFGEAKRLPGGGLNMSSTSRIQQTSVQWQPSANKEQKSI
LSSPMTNPKPEPIDHFHDQLQRSQLSPFSSVQVDQGNSTSESSRDESIEQTSRIGLSSTT
SMKPSNSASSSMSSHMDTSTLLTSRTLSVTSPLGLGNNGKTPVKKPSIGQKKPLDALGSS
PPPSGKKQKVSGGFLDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRVSEASRRVVQE
EEERLILQKIPLQKKLTEIMAKCGLKNMSSDVERCLSLCVEERMRGLISSLIRLSKQRVD
IEKSRHRTIVTSDVREEIMSINRKAREEWEKKQADVEKLQKANEPEGSTGVDGDKEKDEG
RGKSIKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGGDVASGSQP
GKDVTRKNLPAPPRSSRDPQEAEKRIQSSAIAPPGVVRRAVRTQGIITQTRIARSITVKD
VIAVLEREPQMSKSTLIYRLYEKARSNASSAESS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtctatcatgaagcttcttgaagaagacgaggatgaaacaatgcattcgggg
gcggatgtggaggcattcactgctgccctaaacagggatatcggtggagataattcacaa
tctcagccttcggattccgatagcgtaccattgtctcaaggaagcagttatacctcaaat
cagtttgccccatggcaaactgctaaccatgacgaaaatgccagtcgttgtaaccttcaa
gattcagagaccatccagccaaaggaggaaaatgtgtctgatatgcagttgaagagactt
gatacagattctcagaatcagcagcaaaaaaatgattcatcacaggagatcaattccctt
cccgtgcagcatatatcccaggacagttatcaaaccacagaggttgaacaggacacactt
cattcttctagagcagtgaatatgccgaatcctgaaaagaatacgcaaaatccagaatct
ccacatctgaatttacagggaacaaataatttacaacccatgcagagtttgacaacagga
actagtagtctgccacgtgtggcaacagtggcaagtaatcagtcagaatctgcaactggg
tcgatcagccaagcagcaatgaatatagctaaacagggaaaacaagttccttttgccatg
cttttccctcacatacaaccccaacttgataaggacagggcagcgcaactccagacactt
tacgttaaactcaaaaaaaatgaaatttccaaggaaagttttgtaaggaacatgagaagt
ataattggtgaccagatgctcaaaatggctgtatataagtttcaatctcaggcatcgaaa
aactcacagtccgttcccggtcaatttcctcagtctcaggcttcacagcagcaacattcg
cttatgccagccgatgattctagcagtatggcaattgagagtaaagctcaaaagttgcac
gaggtggaaaaccaagccgatctgcgtggagcccaaggaagccagatgtcttcttctagt
ttgactgctgtaaaacaagaaagggatcacacaccatttccaattcagggacttaacaga
caacagcaacaacatttacacttctcacaggcatcttttcccacatttgcaaatgcaggg
aacaattacagtgcatattctgcatctaatgtcaactcttcaacaacacaacctcttaaa
cagcaatctgatgatgcacaaatgagacaaatttcagttcaacagaacagaaatgcaact
cagtttggagtgccagcacaagccatgggaataatgagtgcccctaagtttgaaaagcaa
aatacttttggcgaagccaaaagattacctggtgggggtcttaatatgtcaagtacttca
agaatccagcagacctcagtgcagtggcaaccctctgccaataaagagcagaaaagcatt
ctttcatcaccaatgaccaatccaaagcctgaaccaattgatcattttcatgaccagcta
caaagatcccagttatcgcccttctcctctgttcaagtggatcaaggaaattccacttcg
gaaagttcaagggatgaatctattgaacagacctccagaattggtttatcatcaacgact
agcatgaaaccttcaaattcagcctcgtcttccatgtcatctcatatggacactagcaca
ttgttaacttctcggacactttctgtgacatctccgcttgggctaggaaacaacggaaag
actcctgtgaaaaagccttccattggacagaagaagccccttgatgcgctaggttcctca
cctccaccttcaggaaagaagcaaaaggtgtcgggaggtttcctagatcagagcattgaa
caacttaatgatgttactgctgttagtggagttaatctaagggaagaggaagagcaacta
ttttctgggcccaaggaggacagtcgagtttctgaagcatctcgtcgagttgtgcaagaa
gaagaggaaaggctgattttgcagaaaattccacttcagaagaaattgacagaaatcatg
gcaaaatgtggtttaaagaatatgagcagtgatgtcgaacgatgcttgtcgttgtgtgtg
gaggaaagaatgcgtggactcataagtagtctcatcagactgtcaaaacagagagttgac
attgagaagtcaagacacagaacaattgtcacctcagatgttcgtgaagaaatcatgtca
atcaatcgaaaagcccgggaagaatgggaaaagaaacaagctgatgtggagaaactccaa
aaggcaaatgaacctgaaggtagtactggagttgacggtgataaggagaaggatgagggt
cgcgggaaatcaataaaggtaaacaaggaagaagatgataagatgcgaactacagctgca
aatgttgctgctcgagctgctgttggaggggatgacatgttgtcaaagtggcaattaatg
gctgagcaggcaagacaaaagcgtgaagggggaggtgatgtggcttctggttcacagcct
ggtaaagatgtgactaggaagaatttaccagctcccccaaggagctcaagggacccccaa
gaagctgagaaaaggatccagtcatctgcaatagccccacctggtgttgtgagaagagcc
gtaagaactcaagggataataacacaaactaggattgctcgcagtattactgtaaaagat
gtgatcgccgtcctagaaagagaacctcaaatgtctaagtctacactgatataccgcttg
tatgagaaagctcggtccaatgcttcgtcagctgaatcatcctga
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